Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 5.3e-301 1036.9 542 100.0
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 6.7e-296 1020.0 543 98.2
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 1.7e-243 845.9 530 83.2
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 2.5e-234 815.5 474 85.9
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 2.5e-234 815.5 543 78.3
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 2.9e-230 802.0 542 77.5
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 6.4e-230 800.8 549 77.2
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 1.3e-227 793.1 549 76.5
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.3e-227 793.1 542 75.5
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 3.3e-226 788.5 547 74.8
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 2.8e-225 785.4 477 82.8
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 1.5e-223 779.6 523 76.7
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 7.6e-223 777.3 547 75.1
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 3.2e-221 771.9 503 78.3
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 4.2e-221 771.5 550 72.7
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 1.3e-219 766.5 529 74.5
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 6.2e-217 757.7 555 72.6
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 1.8e-216 756.1 548 71.9
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 4.0e-216 755.0 551 71.9
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 4.0e-216 755.0 543 72.6
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 9.0e-216 753.8 530 71.3
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 2.0e-215 752.7 539 71.8
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 3.4e-215 751.9 538 72.7
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 4.4e-215 751.5 545 71.4
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 4.4e-215 751.5 551 71.0
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 9.9e-215 750.4 522 73.6
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 2.2e-214 749.2 547 73.3
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 3.8e-214 748.4 556 71.6
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 3.8e-214 748.4 522 73.4
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 8.4e-214 747.3 555 71.7
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 8.4e-214 747.3 547 71.3
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 4.2e-213 745.0 527 74.0
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 4.2e-213 745.0 544 72.1
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 5.4e-213 744.6 549 72.5
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 4.6e-212 741.5 527 73.6
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 4.6e-212 741.5 524 73.9
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 1.3e-211 740.0 552 72.3
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 2.3e-211 739.2 536 69.4
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 3.0e-211 738.8 543 71.8
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 5.1e-211 738.0 541 69.5
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 5.1e-211 738.0 547 71.5
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 1.1e-210 736.9 548 69.2
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 2.5e-210 735.7 577 67.9
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 9.6e-210 733.8 542 70.7
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.8e-208 729.6 540 70.4
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 1.8e-208 729.6 546 69.2
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 4.0e-208 728.4 499 74.1
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 5.3e-208 728.0 524 71.2
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 9.0e-208 727.2 544 69.5
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 9.0e-208 727.2 531 70.1
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 3.4e-207 725.3 530 69.4
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 3.8e-206 721.8 549 69.2
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 4.2e-205 718.4 542 68.5
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 5.5e-205 718.0 547 70.4
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 1.6e-204 716.5 535 67.5
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 2.7e-204 715.7 482 74.5
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 4.6e-204 714.9 499 71.9
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.3e-203 713.4 471 74.5
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 1.1e-202 710.3 443 78.3
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 1.5e-202 709.9 545 68.3
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 4.3e-202 708.4 459 76.0
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 1.1e-200 703.7 546 67.8
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 1.2e-199 700.3 532 68.2
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 2.6e-199 699.1 527 67.4
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 4.5e-199 698.4 522 70.9
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 3.5e-196 688.7 440 76.8
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 6.0e-196 688.0 546 65.6
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 5.1e-195 684.9 541 68.4
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 6.3e-193 677.9 555 63.1
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 2.4e-192 676.0 551 63.9
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 3.4e-191 672.2 542 62.9
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 1.3e-190 670.2 543 62.8
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 2.9e-190 669.1 549 62.8
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 2.9e-190 669.1 552 63.2
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 3.8e-190 668.7 476 69.1
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 6.5e-190 667.9 471 70.5
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 6.5e-190 667.9 459 72.3
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 4.2e-189 665.2 548 63.9
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 5.5e-189 664.8 542 62.5
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 9.3e-189 664.1 547 66.7
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 1.2e-188 663.7 549 62.5
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 2.3e-187 659.4 473 67.9
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 4.3e-186 655.2 462 68.6
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 4.3e-186 655.2 530 65.5
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 1.6e-185 653.3 530 65.3
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 2.2e-185 652.9 506 66.0
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 4.8e-185 651.7 523 64.4
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 3.0e-179 632.5 546 63.6
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 1.8e-176 623.2 436 68.8
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 2.0e-175 619.8 436 68.3
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 1.3e-174 617.1 481 65.3
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 9.1e-168 594.3 461 64.2
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 9.4e-165 584.3 545 56.0
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 1.3e-158 563.9 531 54.8
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 6.5e-158 561.6 490 63.1
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 8.0e-156 554.7 488 60.2
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 3.7e-153 545.8 373 74.3
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 1.7e-150 537.0 533 57.2
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 5.0e-142 508.8 406 64.0
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 6.6e-142 508.4 355 67.0
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 3.0e-139 499.6 546 48.4
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 4.4e-138 495.7 382 68.1
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.1e-128 464.5 454 51.3
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 3.2e-128 463.0 491 47.0
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 2.0e-127 460.3 491 48.3
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 3.3e-125 453.0 455 49.7
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 6.0e-119 432.2 448 57.4
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 1.3e-118 431.0 478 46.7
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 2.1e-108 397.1 439 44.6
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 7.6e-74 282.3 479 34.4
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 1.1e-64 251.9 425 34.1
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 7.2e-56 222.6 385 41.6
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 7.9e-55 219.2 134 76.9
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 2.6e-53 214.2 137 73.7
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 8.8e-46 189.1 138 67.4
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.3e-41 175.3 107 81.3
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 1.1e-40 172.2 267 42.7
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 7.7e-34 149.4 439 24.8
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 1.0e-30 139.0 92 70.7
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 1.2e-29 135.6 94 74.5
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 2.0e-26 124.8 114 63.2
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 9.5e-24 115.9 67 83.6
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 3.0e-22 110.9 208 36.5
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 7.5e-21 106.3 195 33.8
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 1.7e-20 105.1 220 32.7
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 4.9e-20 103.6 120 53.3
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 1.2e-15 89.0 80 62.5
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 4.3e-08 63.9 140 34.3
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 7.3e-08 63.2 459 21.1
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 1.4e-06 58.9 61 55.7

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (5 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (4 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (3 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings