Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 7.1e-187 657.1 336 100.0
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 3.2e-147 525.4 328 80.8
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 4.2e-147 525.0 330 80.9
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 9.4e-147 523.9 334 78.4
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.2e-146 523.5 328 80.5
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.2e-146 523.5 328 80.5
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.7e-146 522.3 329 80.5
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 2.7e-146 522.3 334 78.1
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.7e-146 522.3 327 80.7
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 3.6e-146 521.9 333 79.3
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 4.6e-146 521.5 327 81.0
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 7.9e-146 520.8 328 80.2
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 7.9e-146 520.8 327 80.7
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.0e-145 520.4 328 81.4
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.8e-145 519.6 327 80.1
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 3.9e-145 518.5 327 80.1
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 6.7e-145 517.7 328 80.8
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 6.7e-145 517.7 339 78.8
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 1.1e-144 516.9 329 79.3
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.1e-144 516.9 328 80.5
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.5e-144 516.5 328 79.9
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 1.5e-144 516.5 334 78.1
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 2.0e-144 516.2 327 81.0
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.5e-144 515.8 328 80.2
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.5e-144 515.8 327 80.1
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 2.5e-144 515.8 331 78.5
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 2.5e-144 515.8 327 80.1
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 3.3e-144 515.4 328 79.9
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 3.3e-144 515.4 327 79.5
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 3.3e-144 515.4 327 79.5
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 4.3e-144 515.0 327 78.9
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.3e-144 515.0 324 79.9
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.3e-144 515.0 324 80.2
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 5.7e-144 514.6 327 79.2
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 7.4e-144 514.2 327 79.8
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 7.4e-144 514.2 327 79.8
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 7.4e-144 514.2 327 78.9
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 7.4e-144 514.2 334 78.4
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 7.4e-144 514.2 328 79.9
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 7.4e-144 514.2 327 80.4
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 9.7e-144 513.8 327 80.4
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 9.7e-144 513.8 328 78.4
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.7e-144 513.8 327 79.8
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 1.3e-143 513.5 326 80.4
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.3e-143 513.5 327 78.6
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.2e-143 512.7 327 79.5
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.8e-143 512.3 328 78.7
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.7e-143 511.9 329 79.0
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 4.8e-143 511.5 327 79.8
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 6.3e-143 511.1 327 80.1
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.1e-142 510.4 327 79.2
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.4e-142 510.0 324 80.6
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.4e-142 510.0 324 80.6
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.4e-142 510.0 328 79.3
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 2.4e-142 509.2 327 78.9
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.4e-142 509.2 328 79.3
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 3.1e-142 508.8 324 79.9
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 6.9e-142 507.7 327 78.6
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 6.9e-142 507.7 329 78.1
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 9.1e-142 507.3 326 79.1
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 1.2e-141 506.9 327 79.5
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 1.2e-141 506.9 327 79.5
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.5e-141 506.5 330 78.8
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.5e-141 506.5 333 79.0
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 2.6e-141 505.8 327 79.2
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 7.7e-141 504.2 328 78.7
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.2e-140 502.7 328 76.5
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 6.5e-140 501.1 328 79.0
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 6.5e-140 501.1 332 77.1
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 8.5e-140 500.7 327 78.0
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.1e-139 500.4 328 77.1
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.1e-139 500.4 327 77.7
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 4.2e-139 498.4 328 75.3
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.6e-138 496.5 328 77.1
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 2.1e-138 496.1 328 77.1
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 2.1e-138 496.1 328 77.1
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 2.7e-138 495.7 327 77.7
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.6e-138 495.4 328 76.8
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.6e-138 495.4 328 76.8
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.6e-138 495.4 328 76.8
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.6e-138 495.4 328 76.8
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 3.6e-138 495.4 326 76.1
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 4.7e-138 495.0 328 76.8
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 6.1e-138 494.6 355 71.0
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.0e-137 493.8 328 76.5
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 1.8e-137 493.0 328 76.5
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 3.9e-137 491.9 328 76.2
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.9e-137 491.9 324 78.1
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.5e-136 490.0 382 69.1
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.7e-136 488.0 327 76.8
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 7.4e-136 487.6 362 71.8
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.7e-135 486.5 327 76.5
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.2e-135 486.1 304 80.6
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 4.1e-134 481.9 328 75.6
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 7.0e-134 481.1 327 76.5
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.3e-132 476.9 325 73.5
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 5.0e-132 474.9 319 75.2
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.1e-131 473.8 325 74.2
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.9e-131 473.0 329 72.6
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.5e-131 472.6 324 74.4
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.5e-131 472.6 327 74.0
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 8.0e-130 467.6 451 58.3
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 2.3e-129 466.1 329 74.2
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.4e-126 456.8 328 72.6
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 6.5e-124 448.0 278 80.9
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 1.2e-122 443.7 328 72.3
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.6e-122 443.4 298 76.5
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.0e-121 438.7 373 65.4
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 8.8e-121 437.6 327 71.3
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 3.1e-118 429.1 330 69.4
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.2e-115 419.1 326 67.5
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.2e-111 406.4 332 66.6
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 1.4e-110 403.7 316 63.6
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 3.1e-110 402.5 324 59.6
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 5.5e-107 391.7 324 62.3
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.2e-104 384.0 323 63.5
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.3e-103 380.6 234 81.2
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.0e-100 368.6 233 77.7
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 4.7e-90 335.5 273 66.3
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 1.1e-89 334.3 321 59.2
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 2.0e-88 330.1 234 70.1
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.5e-83 313.9 226 73.0
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 1.6e-82 310.5 197 79.7
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.6e-77 293.9 328 53.7
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 1.1e-75 287.7 220 69.5
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 3.3e-75 286.2 334 53.3
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 4.3e-75 285.8 333 45.0
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 2.1e-74 283.5 220 68.6
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.1e-73 281.2 167 81.4
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-71 273.9 220 67.3
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.1e-61 240.4 168 73.8
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.9e-60 236.1 267 51.3
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 5.6e-59 232.3 161 76.4
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 4.2e-54 216.1 328 44.5
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 8.7e-52 208.4 132 79.5
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 1.3e-47 194.5 130 76.9
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.8e-36 157.5 193 46.1
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.4e-35 152.1 99 76.8
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 3.7e-34 149.8 112 70.5
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.1e-33 148.3 89 82.0
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 5.3e-33 146.0 186 47.3
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 4.5e-32 142.9 161 54.7
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 2.5e-30 137.1 69 91.3
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 1.5e-27 127.9 72 84.7
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 7.4e-27 125.6 88 75.0
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 6.3e-26 122.5 65 87.7
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.4e-25 121.3 88 64.8
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 6.9e-25 119.0 86 74.4
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-24 118.2 80 71.2
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 5.0e-23 112.8 74 70.3
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 6.5e-23 112.5 69 81.2
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-21 108.2 71 77.5
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.6e-21 107.8 77 72.7
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.1e-11 75.1 63 65.1
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 3.7e-10 70.1 62 62.9
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 2.6e-08 63.9 41 75.6
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.9e-08 62.8 33 87.9
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 3.2e-06 57.0 85 42.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings