Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR103670 Cardamine hirsuta HOM05D002335 ORTHO05D006692 1.8e-107 392.5 187 100.0
Thhalv10008863m.g Eutrema salsugineum HOM05D002335 ORTHO05D006692 3.9e-102 374.8 189 94.7
BcaC06g35951 Brassica carinata HOM05D002335 ORTHO05D006692 5.1e-102 374.4 190 94.2
AT2G06010 Arabidopsis thaliana HOM05D002335 ORTHO05D006692 6.7e-102 374.0 189 93.1
Carub.0003s2714 Capsella rubella HOM05D002335 ORTHO05D006692 6.7e-102 374.0 189 93.1
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 1.5e-101 372.9 190 94.2
AL3G43590 Arabidopsis lyrata HOM05D002335 ORTHO05D006692 3.3e-101 371.7 189 92.6
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 4.3e-101 371.3 182 96.2
BcaB06g26882 Brassica carinata HOM05D002335 ORTHO05D006692 5.6e-101 370.9 190 93.7
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.3e-100 369.8 182 95.6
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.3e-100 369.8 182 95.6
Sp3g24590 Schrenkiella parvula HOM05D002335 ORTHO05D006692 1.3e-100 369.8 189 92.6
Aa31sc133G40 Aethionema arabicum HOM05D002335 ORTHO05D006692 2.9e-97 358.6 188 88.8
THA.LOC104826590 Tarenaya hassleriana HOM05D002335 ORTHO05D006692 2.5e-88 328.9 182 80.8
CiPaw.04G143300 Carya illinoinensis HOM05D002335 ORTHO05D006692 7.9e-87 323.9 178 80.3
Glyma.13G110300 Glycine max HOM05D002335 ORTHO05D006692 1.8e-86 322.8 181 79.6
Glyma.17G049400 Glycine max HOM05D002335 ORTHO05D006692 3.0e-86 322.0 182 79.1
Phvul.003G130900 Phaseolus vulgaris HOM05D002335 ORTHO05D006692 6.7e-86 320.9 181 79.0
Lj4g0006964 Lotus japonicus HOM05D002335 ORTHO05D006692 1.1e-85 320.1 185 78.4
COL.COLO4_18100 Corchorus olitorius HOM05D002335 ORTHO05D006692 4.3e-85 318.2 201 73.6
Ciclev10009634m.g Citrus clementina HOM05D002335 ORTHO05D006692 5.7e-85 317.8 177 79.1
Manes.03G040300 Manihot esculenta HOM05D002335 ORTHO05D006692 1.3e-84 316.6 184 77.2
THA.LOC104815332 Tarenaya hassleriana HOM05D002335 ORTHO05D006692 1.3e-84 316.6 188 77.7
QL11p000707 Quercus lobata HOM05D002335 ORTHO05D006692 2.2e-84 315.8 185 75.1
RcHm_v2.0_Chr2g0094901 Rosa chinensis HOM05D002335 ORTHO05D006692 2.2e-84 315.8 178 80.3
Eucgr.C03348 Eucalyptus grandis HOM05D002335 ORTHO05D006692 6.3e-84 314.3 181 76.2
Eucgr.C03267 Eucalyptus grandis HOM05D002335 ORTHO05D006692 8.2e-84 313.9 181 76.2
Eucgr.C03501 Eucalyptus grandis HOM05D002335 ORTHO05D006692 1.1e-83 313.5 184 75.5
TWI34G0950 Tripterygium wilfordii HOM05D002335 ORTHO05D006692 1.8e-83 312.8 177 76.8
Eucgr.C03511 Eucalyptus grandis HOM05D002335 ORTHO05D006692 3.1e-83 312.0 179 76.5
VMungo1215G3327 Vigna mungo HOM05D002335 ORTHO05D006692 3.1e-83 312.0 184 76.6
Cfa002991 Carpinus fangiana HOM05D002335 ORTHO05D006692 4.1e-83 311.6 176 76.7
Haze_26010 Corylus avellana HOM05D002335 ORTHO05D006692 4.1e-83 311.6 176 76.7
Potri.018G065800 Populus trichocarpa HOM05D002335 ORTHO05D006692 4.1e-83 311.6 176 76.7
Prupe.7G199200 Prunus persica HOM05D002335 ORTHO05D006692 4.1e-83 311.6 178 78.1
Eucgr.C03340 Eucalyptus grandis HOM05D002335 ORTHO05D006692 5.3e-83 311.2 181 75.7
CSS0035766 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006692 6.9e-83 310.8 177 79.1
CSS0046237 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006692 6.9e-83 310.8 177 79.1
Gohir.A06G076400 Gossypium hirsutum HOM05D002335 ORTHO05D006692 6.9e-83 310.8 179 76.0
FvH4_1g08630 Fragaria vesca HOM05D002335 ORTHO05D006692 9.0e-83 310.5 178 79.8
Oeu049119.1 Olea europaea HOM05D002335 ORTHO05D006692 1.2e-82 310.1 178 79.2
Lalb_Chr12g0200131 Lupinus albus HOM05D002335 ORTHO05D006692 3.4e-82 308.5 179 78.2
EL10Ac8g19062 Beta vulgaris HOM05D002335 ORTHO05D006692 4.5e-82 308.1 178 76.4
Peaxi162Scf00127g00206 Petunia axillaris HOM05D002335 ORTHO05D006692 4.5e-82 308.1 178 75.3
Migut.L01564 Erythranthe guttata HOM05D002335 ORTHO05D006692 1.3e-81 306.6 181 74.6
FAN23G0492 Fragaria x ananassa HOM05D002335 ORTHO05D006692 1.7e-81 306.2 178 78.7
FAN28G2258 Fragaria x ananassa HOM05D002335 ORTHO05D006692 1.7e-81 306.2 178 78.7
MSTRG.10511 Avicennia marina HOM05D002335 ORTHO05D006692 2.2e-81 305.8 178 77.5
AUR62025248 Chenopodium quinoa HOM05D002335 ORTHO05D006692 2.2e-81 305.8 184 75.5
Gorai.010G088300 Gossypium raimondii HOM05D002335 ORTHO05D006692 2.2e-81 305.8 179 75.4
AUR62028936 Chenopodium quinoa HOM05D002335 ORTHO05D006692 2.9e-81 305.4 178 76.4
Solyc07g041780.3 Solanum lycopersicum HOM05D002335 ORTHO05D006692 2.9e-81 305.4 178 76.4
SalBow5G0979 Salvia bowleyana HOM05D002335 ORTHO05D006692 3.8e-81 305.1 178 75.3
SalBow5G2105 Salvia bowleyana HOM05D002335 ORTHO05D006692 3.8e-81 305.1 178 75.3
TAR626G0579 Trochodendron aralioides HOM05D002335 ORTHO05D006692 3.8e-81 305.1 177 74.6
ClCG03G015100 Citrullus lanatus HOM05D002335 ORTHO05D006692 5.0e-81 304.7 178 75.8
Sc18g0002530 Simmondsia chinensis HOM05D002335 ORTHO05D006692 5.0e-81 304.7 177 76.8
GSVIVG01015085001 Vitis vinifera HOM05D002335 ORTHO05D006692 5.0e-81 304.7 177 75.1
MELO3C015519.2 Cucumis melo HOM05D002335 ORTHO05D006692 6.5e-81 304.3 178 76.4
Eucgr.H02780 Eucalyptus grandis HOM05D002335 ORTHO05D006692 6.5e-81 304.3 181 74.0
Sopen12g004030 Solanum pennellii HOM05D002335 ORTHO05D006692 1.1e-80 303.5 175 77.7
CsaV3_1G041010 Cucumis sativus L. HOM05D002335 ORTHO05D006692 1.9e-80 302.8 178 75.8
PGR044G0908 Punica granatum HOM05D002335 ORTHO05D006692 4.2e-80 301.6 178 72.5
MD15G1217300 Malus domestica HOM05D002335 ORTHO05D006692 9.4e-80 300.4 178 74.2
Sopen07g021270 Solanum pennellii HOM05D002335 ORTHO05D006692 9.4e-80 300.4 178 75.8
Psat4g017640 Pisum sativum HOM05D002335 ORTHO05D006692 1.6e-79 299.7 181 74.0
Potri.006G142000 Populus trichocarpa HOM05D002335 ORTHO05D006692 1.6e-79 299.7 176 72.7
Sed0016579 Sechium edule HOM05D002335 ORTHO05D006692 2.1e-79 299.3 177 75.1
PGSC0003DMG400013000 Solanum tuberosum HOM05D002335 ORTHO05D006692 2.1e-79 299.3 178 74.7
Sed0014235 Sechium edule HOM05D002335 ORTHO05D006692 2.7e-79 298.9 178 74.7
Hma1.2p1_0169F.1_g074550 Hydrangea macrophylla HOM05D002335 ORTHO05D006692 3.6e-79 298.5 178 76.4
Hma1.2p1_0169F.1_g074601 Hydrangea macrophylla HOM05D002335 ORTHO05D006692 3.6e-79 298.5 178 76.4
MD02G1091100 Malus domestica HOM05D002335 ORTHO05D006692 6.1e-79 297.7 178 73.6
Actinidia29931 Actinidia chinensis HOM05D002335 ORTHO05D006692 7.9e-79 297.4 179 73.2
Cpa.g.sc28.42 Carica papaya HOM05D002335 ORTHO05D006692 1.0e-78 297.0 200 69.5
FAN19G2961 Fragaria x ananassa HOM05D002335 ORTHO05D006692 1.4e-78 296.6 199 70.9
ECA240G4665 Erigeron canadensis HOM05D002335 ORTHO05D006692 1.8e-78 296.2 179 74.3
Hund26036 Selenicereus undatus HOM05D002335 ORTHO05D006692 1.8e-78 296.2 179 72.1
PGR044G2482 Punica granatum HOM05D002335 ORTHO05D006692 2.3e-78 295.8 178 71.9
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 3.0e-78 295.4 177 75.7
Nn6g35620 Nelumbo nucifera HOM05D002335 ORTHO05D006692 3.9e-78 295.0 177 70.6
SGA_v2.0_scaffold308G48074 Striga asiatica HOM05D002335 ORTHO05D006692 5.1e-78 294.7 175 74.3
CANSAT56G4475 Cannabis sativa HOM05D002335 ORTHO05D006692 7.4e-77 290.8 169 75.1
PGSC0003DMG400000324 Solanum tuberosum HOM05D002335 ORTHO05D006692 9.7e-77 290.4 195 69.2
PSO135G0567 Papaver somniferum HOM05D002335 ORTHO05D006692 8.2e-76 287.3 178 70.2
Aqoxy7G04078 Aquilegia oxysepala HOM05D002335 ORTHO05D006692 1.4e-75 286.6 184 67.4
Dinv25560 Davidia involucrata HOM05D002335 ORTHO05D006692 1.4e-75 286.6 177 70.6
Eucgr.C03331 Eucalyptus grandis HOM05D002335 ORTHO05D006692 5.3e-75 284.6 164 76.2
FAN26G1566 Fragaria x ananassa HOM05D002335 ORTHO05D006692 9.1e-75 283.9 220 63.2
FAN26G0120 Fragaria x ananassa HOM05D002335 ORTHO05D006692 1.2e-74 283.5 220 62.7
DCAR_024750 Daucus carota HOM05D002335 ORTHO05D006692 1.3e-73 280.0 177 70.1
DCAR_031919 Daucus carota HOM05D002335 ORTHO05D006692 1.3e-73 280.0 177 70.1
vmacro17199 Vaccinium macrocarpon HOM05D002335 ORTHO05D006692 1.7e-73 279.6 211 61.6
Rhsim05G0007700 Rhododendron simsii HOM05D002335 ORTHO05D006692 5.0e-73 278.1 161 76.4
CDE05G1851 Ceratophyllum demersum HOM05D002335 ORTHO05D006692 7.2e-72 274.2 177 68.4
Thecc.09G077400 Theobroma cacao HOM05D002335 ORTHO05D006692 7.2e-72 274.2 158 78.5
vmacro06340 Vaccinium macrocarpon HOM05D002335 ORTHO05D006692 7.2e-72 274.2 190 67.9
MBI13_g42820_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 3.6e-71 271.9 182 67.6
HanXRQChr03g0060151 Helianthus annuus HOM05D002335 ORTHO05D006692 3.9e-70 268.5 164 74.4
MBI19_g11823_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 2.6e-69 265.8 178 66.9
MBI19_g37791_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 2.6e-69 265.8 178 66.9
Zm00001eb081660 Zea mays HOM05D002335 ORTHO05D006692 9.7e-69 263.8 178 66.3
arahy.Tifrunner.gnm1.ann1.0T42SY Arachis hypogaea HOM05D002335 ORTHO05D006692 8.2e-68 260.8 178 68.5
CAN.G1963.2 Capsicum annuum HOM05D002335 ORTHO05D006692 1.1e-67 260.4 147 79.6
Cc06_g12140 Coffea canephora HOM05D002335 ORTHO05D006692 1.4e-67 260.0 147 77.6
Solyc12g009080.2 Solanum lycopersicum HOM05D002335 ORTHO05D006692 9.1e-67 257.3 147 77.6
unitig_8.g3530 Utricularia gibba HOM05D002335 ORTHO05D006692 1.2e-66 256.9 187 65.8
arahy.Tifrunner.gnm1.ann1.U5UTMI Arachis hypogaea HOM05D002335 ORTHO05D006692 1.5e-66 256.5 178 69.1
Sabra06G0111100 Salix brachista HOM05D002335 ORTHO05D006692 1.0e-65 253.8 147 74.1
ATR0598G258 Amborella trichopoda HOM05D002335 ORTHO05D006692 3.8e-65 251.9 177 61.0
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 5.0e-65 251.5 144 76.4
Ca_21321_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006692 5.0e-65 251.5 147 75.5
CDE11G0744 Ceratophyllum demersum HOM05D002335 ORTHO05D006692 8.5e-65 250.8 200 59.0
Dinv42391 Davidia involucrata HOM05D002335 ORTHO05D006692 3.2e-64 248.8 164 69.5
Rhsim03G0227700 Rhododendron simsii HOM05D002335 ORTHO05D006692 3.0e-62 242.3 268 48.5
TPR.G12576 Trifolium pratense HOM05D002335 ORTHO05D006692 1.1e-61 240.4 148 70.3
Nitab4.5_0000073g0180 Nicotiana tabacum HOM05D002335 ORTHO05D006692 7.5e-61 237.7 144 74.3
Medtr4g125360 Medicago truncatula HOM05D002335 ORTHO05D006692 2.2e-60 236.1 141 73.8
Peaxi162Scf00928g00035 Petunia axillaris HOM05D002335 ORTHO05D006692 5.9e-58 228.0 170 63.5
Eucgr.C03278 Eucalyptus grandis HOM05D002335 ORTHO05D006692 4.0e-54 215.3 120 76.7
unitig_899.g15177 Utricularia gibba HOM05D002335 ORTHO05D006692 5.7e-53 211.5 164 58.5
Gohir.D06G075400 Gossypium hirsutum HOM05D002335 ORTHO05D006692 6.3e-52 208.0 179 57.0
HPP92_013380 Vanilla planifolia HOM05D002335 ORTHO05D006692 6.3e-52 208.0 142 61.3
Lj7A687T54 Lonicera japonica HOM05D002335 ORTHO05D006692 7.0e-51 204.5 187 57.8
Mapoly0146s0032 Marchantia polymorpha HOM05D002335 ORTHO05D006692 3.5e-50 202.2 174 50.0
Ah.09g231610 Amaranthus hybridus HOM05D002335 ORTHO05D006692 1.3e-44 183.7 199 47.7
SMO361G0221 Selaginella moellendorffii HOM05D002335 ORTHO05D006692 2.0e-42 176.4 173 43.4
SMO361G0519 Selaginella moellendorffii HOM05D002335 ORTHO05D006692 2.0e-42 176.4 173 43.4
AagrBONN_evm.TU.Sc2ySwM_368.225 Anthoceros agrestis HOM05D002335 ORTHO05D006692 6.6e-41 171.4 190 44.7
Nitab4.5_0002966g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006692 5.6e-40 168.3 91 80.2
SEGI_04946 Sequoiadendron giganteum HOM05D002335 ORTHO05D006692 1.2e-39 167.2 121 58.7
Nitab4.5_0011754g0020 Nicotiana tabacum HOM05D002335 ORTHO05D006692 2.1e-39 166.4 175 52.6
Eucgr.C03281 Eucalyptus grandis HOM05D002335 ORTHO05D006692 4.7e-39 165.2 90 77.8
Eucgr.L03294 Eucalyptus grandis HOM05D002335 ORTHO05D006692 1.8e-38 163.3 143 53.8
Pp3c2_1630 Physcomitrium patens HOM05D002335 ORTHO05D006692 4.0e-38 162.2 170 43.5
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 1.7e-36 156.8 162 46.9
AagrBONN_evm.TU.Sc2ySwM_368.521 Anthoceros agrestis HOM05D002335 ORTHO05D006692 6.4e-36 154.8 204 37.7
Pp3c14_25980 Physcomitrium patens HOM05D002335 ORTHO05D006692 1.1e-35 154.1 180 39.4
Eucgr.C03513 Eucalyptus grandis HOM05D002335 ORTHO05D006692 3.0e-33 146.0 149 49.7
CBR_g38469 Chara braunii HOM05D002335 ORTHO05D006692 5.0e-33 145.2 166 41.0
HPP92_013382 Vanilla planifolia HOM05D002335 ORTHO05D006692 2.1e-31 139.8 92 63.0
Os04g0446200 Oryza sativa ssp. japonica HOM05D002335 ORTHO05D006692 2.0e-26 123.2 87 65.5
Thecc.09G077100 Theobroma cacao HOM05D001119 ORTHO05D000862 1.2e-10 70.9 48 75.0
vmacro17200 Vaccinium macrocarpon HOM05D001119 ORTHO05D000862 3.0e-09 66.2 39 69.2

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (11 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (3 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (3 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings