Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 9.0e-184 646.7 316 100.0
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 1.3e-177 626.3 316 97.5
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 1.1e-173 613.2 319 94.7
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 2.4e-160 568.9 319 88.4
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 2.4e-160 568.9 321 87.2
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 3.1e-160 568.5 321 87.5
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 1.7e-158 562.8 323 87.9
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 7.2e-157 557.4 319 86.5
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 4.5e-143 511.5 353 74.8
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 4.4e-138 495.0 320 75.9
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 8.0e-124 447.6 310 70.0
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 5.2e-123 444.9 311 68.8
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 1.2e-122 443.7 317 70.3
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 2.0e-122 443.0 317 69.1
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.3e-121 440.3 307 69.4
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 2.2e-121 439.5 312 68.9
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 2.8e-121 439.1 310 68.7
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 3.7e-121 438.7 343 65.9
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 1.4e-120 436.8 283 72.8
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 1.4e-120 436.8 285 72.3
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 1.8e-120 436.4 310 69.4
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 2.4e-120 436.0 307 69.1
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 4.1e-120 435.3 311 68.2
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 9.2e-120 434.1 304 69.4
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 3.5e-119 432.2 321 66.0
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 5.9e-119 431.4 304 70.4
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.3e-118 429.5 315 66.7
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 2.3e-118 429.5 305 68.5
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 5.0e-118 428.3 285 71.2
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 6.6e-118 427.9 300 68.3
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 1.5e-117 426.8 297 68.7
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 3.3e-117 425.6 319 66.5
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 4.3e-117 425.2 285 70.9
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 9.5e-117 424.1 295 69.2
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 2.8e-116 422.5 296 68.6
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 2.8e-116 422.5 318 65.7
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 1.0e-115 420.6 303 66.3
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 3.1e-115 419.1 303 68.0
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 4.0e-115 418.7 315 66.7
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 5.2e-115 418.3 319 65.5
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 5.2e-115 418.3 308 66.2
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 8.9e-115 417.5 301 67.1
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 1.2e-114 417.2 301 67.1
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 1.5e-114 416.8 305 66.6
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 2.6e-114 416.0 301 69.4
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 4.4e-114 415.2 317 64.7
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 4.4e-114 415.2 301 67.1
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 5.8e-114 414.8 321 65.1
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 7.5e-114 414.5 302 66.2
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 9.8e-114 414.1 306 66.7
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 2.2e-113 412.9 310 65.5
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 2.2e-113 412.9 315 66.7
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 2.9e-113 412.5 305 65.9
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 3.7e-113 412.1 292 67.8
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 1.4e-112 410.2 325 65.2
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 2.4e-112 409.5 294 66.7
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 7.0e-112 407.9 281 68.3
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 2.7e-111 406.0 280 70.0
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 2.7e-111 406.0 305 64.3
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 3.5e-111 405.6 318 65.7
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 1.7e-110 403.3 278 69.4
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 3.0e-110 402.5 310 65.2
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 5.0e-110 401.7 298 66.1
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 8.0e-108 394.4 278 69.4
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 4.0e-107 392.1 311 65.3
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 5.2e-107 391.7 294 64.3
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 5.2e-107 391.7 307 63.8
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 8.9e-107 391.0 193 98.4
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 2.6e-106 389.4 321 62.0
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 2.6e-106 389.4 279 66.7
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 7.5e-106 387.9 315 63.2
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 7.5e-106 387.9 412 52.2
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 8.3e-105 384.4 308 63.0
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 1.4e-104 383.6 310 63.9
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 1.6e-103 380.2 321 61.7
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 1.3e-102 377.1 300 64.3
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 1.7e-102 376.7 193 95.9
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 2.3e-102 376.3 348 57.2
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.5e-98 363.6 297 63.0
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 7.6e-98 361.3 312 59.3
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 1.3e-94 350.5 305 57.7
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 3.1e-91 339.3 292 58.2
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 4.0e-91 339.0 307 56.0
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 5.2e-91 338.6 299 53.8
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 2.9e-89 332.8 329 50.8
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 6.4e-89 331.6 348 53.4
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 6.6e-86 321.6 253 64.0
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 2.8e-84 316.2 301 55.8
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 2.3e-78 296.6 237 65.4
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 5.3e-75 285.4 196 71.4
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 2.9e-73 279.6 209 64.6
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 6.4e-73 278.5 167 83.8
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 1.1e-72 277.7 174 73.6
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 8.7e-70 268.1 163 78.5
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 6.5e-65 251.9 184 66.8
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 4.2e-64 249.2 183 64.5
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 5.5e-64 248.8 257 51.4
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 1.6e-63 247.3 282 45.0
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 1.3e-62 244.2 299 41.8
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.6e-55 220.7 305 41.6
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 4.3e-53 212.6 143 72.7
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 2.5e-45 186.8 145 62.8
unitig_26.g8846 Utricularia gibba HOM05D006927 ORTHO05D009065 1.0e-33 148.3 73 83.6
BcaB08g36753 Brassica carinata HOM05D006927 ORTHO05D009065 1.6e-31 141.0 108 71.3
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.8e-30 137.5 289 35.3
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 5.7e-29 132.5 326 31.9
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 2.2e-28 130.6 81 69.1
Thecc.05G234900 Theobroma cacao HOM05D006927 ORTHO05D009065 2.9e-25 120.2 60 81.7
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 5.0e-25 119.4 336 28.3
SEGI_38351 Sequoiadendron giganteum HOM05D006927 ORTHO05D009065 1.8e-22 110.9 101 52.5
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 7.7e-18 95.5 160 40.0
C09p59490 Brassica napus HOM05D000005 ORTHO05D040849 3.0e-14 83.6 161 38.5
MCO12G090 Micromonas commoda HOM05D006927 ORTHO05D049054 2.2e-12 77.4 358 25.1
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 4.1e-11 73.2 131 35.9
BolC2t06831H Brassica oleracea HOM05D006927 ORTHO05D009065 1.6e-10 71.2 39 97.4
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 1.7e-09 67.8 239 24.7
CBR_g4745 Chara braunii HOM05D000019 ORTHO05D000002 3.8e-09 66.6 68 42.6

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (2 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (2 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (3 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (3 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings