Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 4.0e-162 574.7 291 100.0
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 9.3e-119 430.6 316 76.3
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 9.3e-119 430.6 316 76.3
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 9.3e-119 430.6 316 76.3
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 9.3e-119 430.6 316 76.3
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 9.3e-119 430.6 316 76.3
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 2.1e-118 429.5 316 75.9
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 8.7e-117 424.1 322 73.9
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 1.1e-116 423.7 316 75.0
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 2.5e-116 422.5 322 73.6
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.5e-116 422.5 322 73.6
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 5.7e-116 421.4 224 97.3
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.3e-115 420.2 315 74.0
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.5e-113 413.3 322 71.7
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.0e-109 400.6 317 73.5
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.2e-107 392.9 317 69.4
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 2.6e-105 386.0 320 65.9
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.0e-104 384.0 321 66.0
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.3e-104 383.6 321 65.4
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.7e-104 383.3 321 65.1
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 2.2e-104 382.9 320 65.6
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 2.2e-104 382.9 315 66.3
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 2.9e-104 382.5 319 66.1
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.8e-104 382.1 318 65.4
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 5.0e-104 381.7 321 65.7
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 5.0e-104 381.7 320 65.3
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 5.0e-104 381.7 320 65.0
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 5.0e-104 381.7 315 66.7
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.0e-104 381.7 315 66.7
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 8.5e-104 380.9 317 65.6
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 8.5e-104 380.9 318 66.4
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.1e-103 380.6 317 65.9
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.1e-103 380.6 300 70.3
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 2.5e-103 379.4 315 66.0
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.5e-103 379.4 315 66.3
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 3.2e-103 379.0 320 64.7
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 5.5e-103 378.3 318 65.1
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 5.5e-103 378.3 315 65.1
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 1.6e-102 376.7 313 66.1
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.6e-102 376.7 315 64.8
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 2.7e-102 375.9 315 65.1
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 6.1e-102 374.8 317 65.9
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 6.1e-102 374.8 317 65.9
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.8e-101 373.2 320 64.1
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 3.9e-101 372.1 321 64.2
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 2.0e-100 369.8 321 63.6
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 2.6e-100 369.4 306 66.7
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 2.6e-100 369.4 318 64.2
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 3.3e-100 369.0 320 62.8
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 3.3e-100 369.0 321 62.6
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 4.4e-100 368.6 321 63.9
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 9.7e-100 367.5 319 62.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 9.7e-100 367.5 320 63.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 9.7e-100 367.5 321 62.3
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 9.7e-100 367.5 321 62.9
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.3e-99 367.1 320 62.2
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.7e-99 366.7 321 62.9
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.2e-99 366.3 313 63.3
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.2e-99 366.3 320 62.5
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.2e-99 366.3 313 63.9
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 3.7e-99 365.5 313 63.9
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 4.8e-99 365.2 313 63.3
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 6.3e-99 364.8 313 63.9
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 1.1e-98 364.0 321 62.9
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 1.1e-98 364.0 321 62.9
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.1e-98 364.0 355 59.4
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.4e-98 363.6 319 62.7
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.1e-98 362.5 317 62.8
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 4.1e-98 362.1 314 63.1
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.3e-98 361.7 313 62.3
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.3e-98 361.7 313 62.3
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 7.0e-98 361.3 313 62.3
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 7.0e-98 361.3 315 61.0
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 9.1e-98 360.9 321 62.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.1e-98 360.9 319 62.1
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 1.2e-97 360.5 313 62.6
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.5e-97 360.1 325 60.6
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.5e-97 360.1 315 61.0
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 5.9e-97 358.2 320 61.2
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.3e-96 357.1 342 57.0
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 1.7e-96 356.7 313 61.7
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.2e-96 356.3 314 62.1
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.9e-96 355.9 320 59.7
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.9e-96 355.9 314 62.1
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.9e-95 353.2 313 60.7
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.9e-95 353.2 373 55.8
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 3.2e-95 352.4 314 59.9
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 3.2e-95 352.4 315 59.7
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 3.2e-95 352.4 314 59.6
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 3.2e-95 352.4 313 62.0
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 9.4e-95 350.9 312 61.5
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.6e-94 350.1 319 60.5
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 3.6e-94 349.0 319 61.8
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.7e-94 348.6 321 59.2
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 6.1e-94 348.2 305 63.0
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.4e-93 347.1 288 63.9
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 2.0e-92 343.2 323 58.2
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 5.7e-92 341.7 323 57.9
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 6.3e-91 338.2 315 58.7
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 8.2e-91 337.8 316 59.5
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.1e-90 334.3 360 54.4
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 5.9e-89 331.6 321 59.2
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 2.2e-88 329.7 443 47.2
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.5e-87 326.2 305 60.0
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.8e-85 320.1 236 68.2
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 3.0e-85 319.3 316 58.5
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.2e-84 317.4 321 54.2
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 2.4e-82 309.7 321 57.3
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.6e-81 307.0 286 59.1
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.6e-81 307.0 322 53.4
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 3.8e-80 302.4 232 67.2
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 2.5e-79 299.7 315 53.3
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 2.8e-75 286.2 283 61.8
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 4.8e-75 285.4 318 53.1
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 5.4e-74 282.0 226 65.5
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 3.5e-73 279.3 234 60.7
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.5e-71 273.1 312 51.0
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 3.2e-66 256.1 163 80.4
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.7e-65 253.1 309 47.2
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.9e-64 249.6 314 44.3
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 8.6e-64 248.1 309 49.5
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 5.6e-63 245.4 320 44.7
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 4.0e-61 239.2 161 74.5
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 6.0e-57 225.3 225 56.9
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.2e-54 217.6 279 54.8
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-54 217.6 134 81.3
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.1e-50 204.5 164 74.4
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 1.4e-50 204.1 131 80.2
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.1e-50 202.6 224 51.3
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 2.0e-44 183.7 330 35.2
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.9e-43 179.9 311 41.8
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.1e-37 161.4 99 79.8
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.4e-37 161.0 151 57.0
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 6.8e-37 158.7 188 51.6
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.2e-35 153.7 205 48.3
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 4.9e-35 152.5 205 48.3
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.6e-33 147.5 204 47.5
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 8.7e-32 141.7 90 80.0
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.9e-31 140.6 89 77.5
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.8e-29 134.0 226 42.9
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 5.8e-28 129.0 89 75.3
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 4.9e-27 125.9 69 84.1
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.9e-26 124.0 78 82.1
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 7.1e-26 122.1 158 46.8
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 1.1e-23 114.8 72 76.4
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 3.6e-22 109.8 104 55.8
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.6e-20 103.6 82 64.6
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 1.3e-19 101.3 69 73.9
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.9e-18 97.4 65 78.5
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.9e-15 87.4 71 63.4
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 5.6e-15 85.9 64 71.9
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.1e-10 71.6 167 30.5
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 7.4e-07 58.9 34 76.5
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 2.1e-06 57.4 50 60.0
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 4.8e-06 56.2 50 52.0

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (3 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings