Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 2.0e-200 702.2 346 100.0
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 4.3e-179 631.3 360 87.2
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 9.5e-179 630.2 344 87.8
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.1e-178 629.0 393 80.4
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 3.5e-173 611.7 344 85.2
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 6.2e-170 600.9 343 82.2
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 1.1e-169 600.1 344 82.8
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 1.8e-169 599.4 344 82.0
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 4.0e-169 598.2 346 81.8
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 1.5e-168 596.3 343 81.3
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 2.0e-168 595.9 344 81.7
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 2.6e-168 595.5 344 81.4
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 2.6e-168 595.5 345 81.2
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 2.6e-168 595.5 344 80.8
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 4.4e-168 594.7 343 81.0
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 9.9e-168 593.6 344 80.5
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 9.9e-168 593.6 344 80.2
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 1.7e-167 592.8 344 80.8
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 2.9e-167 592.0 344 80.2
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 2.9e-167 592.0 344 80.5
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 3.8e-167 591.7 344 80.2
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 1.1e-166 590.1 344 81.7
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 1.1e-166 590.1 344 80.2
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 1.4e-166 589.7 343 80.8
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.2e-166 588.6 344 81.1
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.2e-166 588.6 344 81.1
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 5.4e-166 587.8 345 81.4
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 7.1e-166 587.4 344 80.2
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 9.3e-166 587.0 344 79.9
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 9.3e-166 587.0 345 79.4
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 1.6e-165 586.3 344 79.9
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 1.6e-165 586.3 343 80.5
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 2.1e-165 585.9 344 80.2
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 3.5e-165 585.1 344 79.4
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 4.6e-165 584.7 345 80.0
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 4.6e-165 584.7 345 80.0
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 4.6e-165 584.7 345 80.3
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 4.6e-165 584.7 344 79.4
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 7.8e-165 583.9 345 79.1
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 7.8e-165 583.9 345 79.4
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 1.3e-164 583.2 345 79.7
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 1.3e-164 583.2 361 76.7
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 1.7e-164 582.8 344 80.8
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 5.1e-164 581.3 345 80.0
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 6.6e-164 580.9 344 78.8
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 6.6e-164 580.9 345 79.4
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 8.7e-164 580.5 342 79.2
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 1.1e-163 580.1 344 79.4
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 1.1e-163 580.1 345 80.0
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 1.5e-163 579.7 345 79.7
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 1.9e-163 579.3 343 77.3
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 2.5e-163 578.9 343 79.0
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 2.5e-163 578.9 345 79.1
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 2.5e-163 578.9 343 79.6
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 2.5e-163 578.9 342 79.5
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 3.3e-163 578.6 343 79.6
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 4.3e-163 578.2 342 78.7
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 5.6e-163 577.8 345 78.8
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 7.3e-163 577.4 343 79.3
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 7.3e-163 577.4 344 78.2
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 7.3e-163 577.4 344 79.1
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 7.3e-163 577.4 345 78.8
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 9.6e-163 577.0 344 79.1
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 9.6e-163 577.0 345 78.6
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 9.6e-163 577.0 343 79.0
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 1.3e-162 576.6 344 77.9
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 1.3e-162 576.6 343 78.1
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 1.6e-162 576.2 342 78.7
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 2.1e-162 575.9 345 78.3
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 2.8e-162 575.5 354 77.1
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 3.6e-162 575.1 345 77.7
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 4.8e-162 574.7 344 80.2
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 6.2e-162 574.3 344 77.6
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 1.4e-161 573.2 342 77.5
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 1.8e-161 572.8 344 79.1
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 1.8e-161 572.8 344 77.0
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 2.4e-161 572.4 342 79.2
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 3.1e-161 572.0 343 78.4
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 2.6e-160 568.9 344 78.8
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 4.5e-160 568.2 344 78.2
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 4.5e-160 568.2 357 76.2
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 5.8e-160 567.8 342 78.1
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 7.6e-160 567.4 340 77.6
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 1.3e-159 566.6 343 78.1
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 1.7e-159 566.2 342 76.6
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 2.2e-159 565.8 343 77.6
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 2.9e-159 565.5 342 76.0
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 6.4e-159 564.3 342 75.7
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 8.4e-159 563.9 343 75.8
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 5.4e-158 561.2 342 77.2
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 3.5e-157 558.5 344 76.7
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 2.3e-156 555.8 353 77.1
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 3.9e-156 555.1 346 76.3
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 1.1e-155 553.5 318 82.1
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 1.3e-154 550.1 361 74.8
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 1.1e-153 547.0 345 75.9
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 2.4e-153 545.8 433 63.7
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 7.6e-152 540.8 343 74.9
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 4.6e-149 531.6 446 61.0
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 3.7e-146 521.9 351 72.6
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 8.2e-146 520.8 357 71.4
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 1.4e-145 520.0 341 72.1
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 1.8e-140 503.1 305 77.4
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 5.1e-140 501.5 341 69.8
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 3.3e-139 498.8 344 71.5
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 1.6e-138 496.5 339 69.0
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 4.8e-138 495.0 339 69.6
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 7.6e-136 487.6 342 69.3
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.9e-134 483.0 257 90.7
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 8.8e-132 474.2 258 88.4
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 4.1e-129 465.3 326 67.5
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 2.9e-127 459.1 274 79.6
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 6.5e-127 458.0 344 66.9
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 5.5e-118 428.3 339 61.9
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 7.2e-118 427.9 312 68.6
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 1.2e-117 427.2 312 68.3
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 7.7e-112 407.9 384 56.5
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 8.8e-108 394.4 340 55.9
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 7.5e-107 391.3 234 76.5
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 4.8e-106 388.7 228 81.6
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 6.5e-103 378.3 312 62.2
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 1.5e-102 377.1 245 74.3
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 1.1e-97 360.9 339 53.1
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 7.0e-97 358.2 346 55.8
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 6.1e-93 345.1 344 52.0
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 6.6e-87 325.1 190 81.1
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 8.6e-87 324.7 254 64.2
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 7.3e-86 321.6 189 80.4
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 1.2e-75 287.7 173 76.9
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 5.4e-73 278.9 219 64.8
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 1.2e-61 241.1 157 72.0
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 2.2e-58 230.3 134 82.1
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 5.4e-49 199.1 115 76.5
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 5.1e-47 192.6 114 76.3
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 1.6e-45 187.6 344 35.8
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 3.8e-42 176.4 257 45.9
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 6.7e-39 165.6 94 84.0
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 1.1e-38 164.9 99 76.8
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 4.5e-35 152.9 357 31.7
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 6.0e-24 115.9 255 35.3
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 3.9e-23 113.2 79 72.2
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.1e-22 111.7 171 43.9
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.5e-22 110.5 95 61.1
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 4.2e-17 93.2 87 55.2
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 5.3e-12 76.3 45 77.8
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 1.7e-10 71.2 37 83.8

Acer truncatum (3 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (2 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (6 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (3 genes)
Lotus japonicus (3 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (2 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings