Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0561G080 Amborella trichopoda HOM05D005653 ORTHO05D007013 8.1e-100 367.1 185 100.0
Potri.003G168800 Populus trichocarpa HOM05D005653 ORTHO05D007013 3.1e-75 285.4 179 75.4
arahy.Tifrunner.gnm1.ann1.8E8WMD Arachis hypogaea HOM05D005653 ORTHO05D007013 5.3e-75 284.6 179 74.3
arahy.Tifrunner.gnm1.ann1.K5AHSV Arachis hypogaea HOM05D005653 ORTHO05D007013 5.3e-75 284.6 179 74.3
Sabra03G0123700 Salix brachista HOM05D005653 ORTHO05D007013 1.2e-74 283.5 179 75.4
Psat3g188000 Pisum sativum HOM05D005653 ORTHO05D007013 1.5e-74 283.1 179 74.3
Ca_07130_v3 Cicer arietinum L. HOM05D005653 ORTHO05D007013 3.4e-74 282.0 177 76.3
Cc11_g17180 Coffea canephora HOM05D005653 ORTHO05D007013 4.5e-74 281.6 179 75.4
Glyma.02G097200 Glycine max HOM05D005653 ORTHO05D007013 4.5e-74 281.6 179 74.9
Nn4g22260 Nelumbo nucifera HOM05D005653 ORTHO05D007013 4.5e-74 281.6 179 76.0
CiPaw.05G107200 Carya illinoinensis HOM05D005653 ORTHO05D007013 5.8e-74 281.2 179 74.3
Dinv17587 Davidia involucrata HOM05D005653 ORTHO05D007013 7.6e-74 280.8 171 77.8
Eucgr.B03521 Eucalyptus grandis HOM05D005653 ORTHO05D007013 9.9e-74 280.4 179 75.4
Lj3A1072T24 Lonicera japonica HOM05D005653 ORTHO05D007013 1.3e-73 280.0 179 74.3
FvH4_4g23470 Fragaria vesca HOM05D005653 ORTHO05D007013 1.7e-73 279.6 179 72.6
FAN12G1333 Fragaria x ananassa HOM05D005653 ORTHO05D007013 1.7e-73 279.6 179 72.6
MD13G1122300 Malus domestica HOM05D005653 ORTHO05D007013 1.7e-73 279.6 179 74.3
DCAR_024662 Daucus carota HOM05D005653 ORTHO05D007013 2.2e-73 279.3 179 72.6
Glyma.18G284300 Glycine max HOM05D005653 ORTHO05D007013 2.2e-73 279.3 179 74.3
Medtr7g022310 Medicago truncatula HOM05D005653 ORTHO05D007013 2.2e-73 279.3 179 73.7
Phvul.008G017200 Phaseolus vulgaris HOM05D005653 ORTHO05D007013 2.2e-73 279.3 179 73.7
CANSAT01G0083 Cannabis sativa HOM05D005653 ORTHO05D007013 4.9e-73 278.1 179 73.7
FAN07G0042 Fragaria x ananassa HOM05D005653 ORTHO05D007013 4.9e-73 278.1 179 72.1
Rhsim12G0094700 Rhododendron simsii HOM05D005653 ORTHO05D007013 4.9e-73 278.1 179 73.7
Migut.K01002 Erythranthe guttata HOM05D005653 ORTHO05D007013 6.4e-73 277.7 177 72.3
Lsat_1_v5_gn_8_147520 Lactuca sativa HOM05D005653 ORTHO05D007013 6.4e-73 277.7 179 71.5
RcHm_v2.0_Chr4g0429841 Rosa chinensis HOM05D005653 ORTHO05D007013 6.4e-73 277.7 179 73.2
QL03p051746 Quercus lobata HOM05D005653 ORTHO05D007013 8.4e-73 277.3 175 72.6
Sed0008245 Sechium edule HOM05D005653 ORTHO05D007013 8.4e-73 277.3 179 72.6
Gohir.D01G100300 Gossypium hirsutum HOM05D005653 ORTHO05D007013 1.4e-72 276.6 179 73.7
Gorai.002G181300 Gossypium raimondii HOM05D005653 ORTHO05D007013 1.4e-72 276.6 179 73.7
MBI11_g05337_MAGBIO Magnolia biondii HOM05D005653 ORTHO05D007013 1.4e-72 276.6 179 74.9
Cfa009387 Carpinus fangiana HOM05D005653 ORTHO05D007013 1.9e-72 276.2 179 72.6
Actinidia39799 Actinidia chinensis HOM05D005653 ORTHO05D007013 2.4e-72 275.8 179 71.5
CsaV3_6G008140 Cucumis sativus L. HOM05D005653 ORTHO05D007013 2.4e-72 275.8 179 72.6
HPP92_006272 Vanilla planifolia HOM05D005653 ORTHO05D007013 2.4e-72 275.8 179 73.7
VMungo1383G3612 Vigna mungo HOM05D005653 ORTHO05D007013 2.4e-72 275.8 179 73.2
Aqoxy5G03294 Aquilegia oxysepala HOM05D005653 ORTHO05D007013 3.2e-72 275.4 179 72.6
Gohir.A01G153900 Gossypium hirsutum HOM05D005653 ORTHO05D007013 3.2e-72 275.4 179 73.2
Lalb_Chr10g0092041 Lupinus albus HOM05D005653 ORTHO05D007013 4.2e-72 275.0 179 73.7
Thecc.02G202100 Theobroma cacao HOM05D005653 ORTHO05D007013 4.2e-72 275.0 179 72.6
CSS0037525 Camellia sinensis var. sinensis HOM05D005653 ORTHO05D007013 7.1e-72 274.2 179 72.6
CSS0048785 Camellia sinensis var. sinensis HOM05D005653 ORTHO05D007013 7.1e-72 274.2 179 72.6
ClCG06G002070 Citrullus lanatus HOM05D005653 ORTHO05D007013 7.1e-72 274.2 179 73.2
Duzib268G1459 Durio zibethinus HOM05D005653 ORTHO05D007013 7.1e-72 274.2 179 73.2
Sabra01G0042500 Salix brachista HOM05D005653 ORTHO05D007013 7.1e-72 274.2 179 72.6
TAR374G1158 Trochodendron aralioides HOM05D005653 ORTHO05D007013 7.1e-72 274.2 179 72.6
MELO3C022321.2 Cucumis melo HOM05D005653 ORTHO05D007013 9.3e-72 273.9 179 72.1
Peaxi162Scf00128g01533 Petunia axillaris HOM05D005653 ORTHO05D007013 1.2e-71 273.5 179 72.1
Ah.03g135980 Amaranthus hybridus HOM05D005653 ORTHO05D007013 2.7e-71 272.3 173 75.1
COL.COLO4_05009 Corchorus olitorius HOM05D005653 ORTHO05D007013 2.7e-71 272.3 171 74.9
Manes.12G008600 Manihot esculenta HOM05D005653 ORTHO05D007013 2.7e-71 272.3 179 72.6
Prupe.1G222900 Prunus persica HOM05D005653 ORTHO05D007013 3.5e-71 271.9 177 71.2
Hund06105 Selenicereus undatus HOM05D005653 ORTHO05D007013 3.5e-71 271.9 171 75.4
Sopen05g011500 Solanum pennellii HOM05D005653 ORTHO05D007013 3.5e-71 271.9 179 72.1
CDE05G3552 Ceratophyllum demersum HOM05D005653 ORTHO05D007013 6.0e-71 271.2 179 71.5
Lj1g0002640 Lotus japonicus HOM05D005653 ORTHO05D007013 7.9e-71 270.8 179 72.1
Solyc05g015860.4 Solanum lycopersicum HOM05D005653 ORTHO05D007013 7.9e-71 270.8 179 71.5
GSVIVG01010526001 Vitis vinifera HOM05D005653 ORTHO05D007013 7.9e-71 270.8 179 70.9
PSO017G4941 Papaver somniferum HOM05D005653 ORTHO05D007013 1.0e-70 270.4 179 72.1
PGR102G3026 Punica granatum HOM05D005653 ORTHO05D007013 1.0e-70 270.4 179 70.9
HanXRQChr08g0209891 Helianthus annuus HOM05D005653 ORTHO05D007013 1.3e-70 270.0 171 72.5
HanXRQChr08g0209781 Helianthus annuus HOM05D005653 ORTHO05D007013 1.8e-70 269.6 179 70.4
AL1G41470 Arabidopsis lyrata HOM05D005653 ORTHO05D007013 2.3e-70 269.2 176 70.5
AT1G27980 Arabidopsis thaliana HOM05D005653 ORTHO05D007013 2.3e-70 269.2 176 70.5
Carub.0001s2643 Capsella rubella HOM05D005653 ORTHO05D007013 2.3e-70 269.2 176 70.5
C03p74690 Brassica napus HOM05D005653 ORTHO05D007013 3.0e-70 268.9 176 71.0
vmacro16096 Vaccinium macrocarpon HOM05D005653 ORTHO05D007013 3.0e-70 268.9 197 66.0
BraA08t34547Z Brassica rapa HOM05D005653 ORTHO05D007013 3.9e-70 268.5 176 71.0
PSO478G2696 Papaver somniferum HOM05D005653 ORTHO05D007013 3.9e-70 268.5 179 72.6
SalBow2G0115 Salvia bowleyana HOM05D005653 ORTHO05D007013 5.1e-70 268.1 179 67.6
SEGI_37890 Sequoiadendron giganteum HOM05D005653 ORTHO05D007013 5.1e-70 268.1 179 72.6
Nitab4.5_0000340g0070 Nicotiana tabacum HOM05D005653 ORTHO05D007013 6.7e-70 267.7 169 74.0
THA.LOC104820527 Tarenaya hassleriana HOM05D005653 ORTHO05D007013 6.7e-70 267.7 176 68.8
AUR62005648 Chenopodium quinoa HOM05D005653 ORTHO05D007013 1.1e-69 266.9 173 72.3
TWI18G0855 Tripterygium wilfordii HOM05D005653 ORTHO05D007013 1.1e-69 266.9 179 69.8
Aa31sc146G110 Aethionema arabicum HOM05D005653 ORTHO05D007013 1.5e-69 266.5 176 69.3
BolC3t19717H Brassica oleracea HOM05D005653 ORTHO05D007013 1.9e-69 266.2 176 69.9
Ciclev10031168m.g Citrus clementina HOM05D005653 ORTHO05D007013 1.9e-69 266.2 179 70.9
Atru.BG.292.p Acer truncatum HOM05D005653 ORTHO05D007013 3.3e-69 265.4 176 73.3
Thhalv10009378m.g Eutrema salsugineum HOM05D005653 ORTHO05D007013 3.3e-69 265.4 176 69.3
AUR62028902 Chenopodium quinoa HOM05D005653 ORTHO05D007013 4.3e-69 265.0 173 71.7
Sp1g24170 Schrenkiella parvula HOM05D005653 ORTHO05D007013 4.3e-69 265.0 175 69.7
PGSC0003DMG400019810 Solanum tuberosum HOM05D005653 ORTHO05D007013 4.3e-69 265.0 182 69.2
CAN.G789.3 Capsicum annuum HOM05D005653 ORTHO05D007013 5.6e-69 264.6 173 71.1
unitig_26.g10407 Utricularia gibba HOM05D005653 ORTHO05D007013 5.6e-69 264.6 171 71.3
Os01g0100900 Oryza sativa ssp. japonica HOM05D005653 ORTHO05D007013 2.8e-68 262.3 179 70.4
A08p25960 Brassica napus HOM05D005653 ORTHO05D007013 2.2e-65 252.7 206 60.7
Zm00001eb334070 Zea mays HOM05D005653 ORTHO05D007013 3.0e-62 242.3 213 58.7
ECA233G0831 Erigeron canadensis HOM05D005653 ORTHO05D007013 1.9e-61 239.6 163 67.5
Mapoly0064s0066 Marchantia polymorpha HOM05D005653 ORTHO05D007013 4.3e-61 238.4 179 63.7
SMO117G0322 Selaginella moellendorffii HOM05D005653 ORTHO05D007013 3.1e-59 232.3 171 63.7
Pp3c25_6390 Physcomitrium patens HOM05D005653 ORTHO05D007013 3.4e-58 228.8 177 61.0
Haze_12446 Corylus avellana HOM05D005653 ORTHO05D007013 1.3e-57 226.9 179 63.7
SHI17985 Sapria himalayana HOM05D005653 ORTHO05D007013 1.7e-57 226.5 205 56.1
EL10Ac6g13536 Beta vulgaris HOM05D005653 ORTHO05D007013 2.5e-56 222.6 179 62.6
SGA_v2.0_scaffold46G17390 Striga asiatica HOM05D005653 ORTHO05D007013 4.6e-55 218.4 153 68.6
CARHR027410 Cardamine hirsuta HOM05D005653 ORTHO05D007013 8.7e-54 214.2 133 70.7
CBR_g49954 Chara braunii HOM05D005653 ORTHO05D007013 6.5e-49 198.0 169 54.4
PRCOL_00004852 Prasinoderma coloniale HOM05D005653 ORTHO05D007013 2.5e-45 186.0 172 51.2
MCO01G158 Micromonas commoda HOM05D005653 ORTHO05D007013 1.4e-32 143.7 170 42.9
Cfa025335 Carpinus fangiana HOM05D005653 ORTHO05D007013 4.2e-32 142.1 181 40.9
Haze_26914 Corylus avellana HOM05D005653 ORTHO05D007013 9.4e-32 141.0 168 39.3
Cre03.g155051 Chlamydomonas reinhardtii HOM05D005653 ORTHO05D007013 2.0e-29 133.3 178 36.5
Potri.001G059001 Populus trichocarpa HOM05D005653 ORTHO05D007013 1.2e-21 107.5 75 64.0
Nn1g00005 Nelumbo nucifera HOM05D005653 ORTHO05D007013 1.8e-19 100.1 58 77.6
Nn1g02921 Nelumbo nucifera HOM05D005653 ORTHO05D007013 1.8e-19 100.1 58 77.6
Sc04g0010280 Simmondsia chinensis HOM05D005653 ORTHO05D007013 1.9e-16 90.1 63 69.8
MELO3C032670.2 Cucumis melo HOM05D011747 ORTHO05D007013 2.3e-14 83.2 51 72.5
MELO3C031393.2 Cucumis melo HOM05D005653 ORTHO05D005467 9.8e-13 77.8 83 50.6
BcaC05g26610 Brassica carinata HOM05D005653 ORTHO05D007013 1.2e-10 70.9 137 38.7
Actinidia18467 Actinidia chinensis HOM05D005653 ORTHO05D007013 8.6e-09 64.7 90 41.1
CARHR035100 Cardamine hirsuta HOM05D005653 ORTHO05D007013 8.0e-07 58.2 34 82.4
BolC5t31379H Brassica oleracea HOM05D005653 ORTHO05D007013 3.0e-06 56.2 39 71.8
Actinidia40343 Actinidia chinensis HOM05D000263 ORTHO05D010929 5.2e-06 55.5 42 57.1

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (0 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (3 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (1 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings