Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G5440 LG-11 + View
Acer truncatum Atru.chr8.1639 chr8 - View
Acer truncatum Atru.chr12.965 chr12 + View
Acer truncatum Atru.chr3.3382 chr3 - View
Actinidia chinensis Actinidia06708 Lachesis_group22 + View
Actinidia chinensis Actinidia18574 Lachesis_group17 - View
Arabidopsis lyrata AL6G14210 scaffold_6 + View
Arabidopsis lyrata AL4G32670 scaffold_4 - View
Avicennia marina MSTRG.21064 ScioBoG_26769_HRSCAF_26899 - View
Avicennia marina MSTRG.9109 ScioBoG_11560_HRSCAF_11609 - View
Avicennia marina MSTRG.19228 ScioBoG_25048_HRSCAF_25167 + View
Amaranthus hybridus Ah.08g210980 Protein ROS1A (EC 3.2.2.-) (Protein REPRESSOR OF SILENCING 1 homolog a) (Protein ROS1 homolog) (OsROS1) (Protein THICK ALEURONE 2) AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy1G00942 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.66FLD0 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CUT3DD PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT5G04560 HhH-GPD base excision DNA repair family protein Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele. DEMETER (DME)%3B CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257)%2C Endonuclease III-like%2C iron-sulphur cluster loop motif (InterPro:IPR003651)%2C HhH-GPD domain (InterPro:IPR003265)%3B BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1)%3B Has 3638 Blast hits to 3482 proteins in 1335 species: Archae - 238%3B Bacteria - 2315%3B Metazoa - 178%3B Fungi - 96%3B Plants - 343%3B Viruses - 0%3B Other Eukaryotes - 468 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT2G36490 demeter-like 1 A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants%2C an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1%2C a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG%2C CpNpG or CpNpN)%2C although many others are affected primarily in non-CpG contexts. demeter-like 1 (DML1)%3B FUNCTIONS IN: protein binding%2C DNA N-glycosylase activity%2C DNA-(apurinic or apyrimidinic site) lyase activity%3B INVOLVED IN: DNA repair%2C chromatin silencing%2C negative regulation of chromatin silencing%2C DNA methylation%2C DNA demethylation%3B LOCATED IN: nucleus%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257)%2C Endonuclease III-like%2C iron-sulphur cluster loop motif (InterPro:IPR003651)%2C HhH-GPD domain (InterPro:IPR003265)%3B BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaC06g32166 ChrC06 + View
Brassica carinata BcaC02g11765 ChrC02 - View
Brassica napus A05p09310 A05 + View
Brassica napus A10p31520 A10 - View
Brassica napus C09p72210 C09 - View
Brassica oleracea BolC4t22808H C4 + View
Brassica oleracea BolC9t59965H C9 - View
Brassica rapa BraA10t45198Z A10 - View
Camellia sinensis var. sinensis CSS0014168 unnamed protein product [Vitis vinifera] Chr11 - View
Camellia sinensis var. sinensis CSS0047502 PREDICTED: transcriptional activator DEMETER isoform X1 [Vitis vinifera] Chr1 - View
Camellia sinensis var. sinensis CSS0002130 PREDICTED: transcriptional activator DEMETER isoform X2 [Vitis vinifera] Chr7 - View
Camellia sinensis var. sinensis CSS0012668 PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera] Chr10 - View
Capsicum annuum CAN.G135.68 PGAv.1.6.scaffold135 + View
Capsicum annuum CAN.G824.26 PGAv.1.6.scaffold824 + View
Cannabis sativa CANSAT56G1981 NC_044371.1 - View
Cicer arietinum L. Ca_10493_v3 Ca_LG4_v3 + View
Corylus avellana Haze_23450 Similar to ROS1A: Protein ROS1A (Oryza sativa subsp. japonica OX%3D39947) 6 - View
Corylus avellana Haze_02614 Similar to DME: Transcriptional activator DEMETER (Arabidopsis thaliana OX%3D3702) 1 - View
Corylus avellana Haze_19533 Similar to ROS1A: Protein ROS1A (Oryza sativa subsp. japonica OX%3D39947) 10 + View
Coffea canephora Cc06_g05230 Putative Repressor of silencing 1 chr6 + View
Coffea canephora Cc02_g10250 Putative uncharacterized protein chr2 - View
Citrus clementina Ciclev10010892m.g scaffold_6 - View
Citrus clementina Ciclev10030474m.g scaffold_4 - View
Citrus clementina Ciclev10027676m.g scaffold_8 - View
Carpinus fangiana Cfa011221 Cfa04 + View
Carpinus fangiana Cfa010084 Cfa04 - View
Cardamine hirsuta CARHR208710 DNA glycosylase Chr6 - View
Carya illinoinensis CiPaw.14G028400 PTHR10359:SF28 - TRANSCRIPTIONAL ACTIVATOR DEMETER Chr14 + View
Carya illinoinensis CiPaw.09G008500 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED Chr09 + View
Carya illinoinensis CiPaw.13G036100 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Chr13 + View
Citrullus lanatus ClCG10G019400 Repressor of silencing 1 CG_Chr10 - View
Citrullus lanatus ClCG05G021570 DEMETER CG_Chr05 + View
Citrullus lanatus ClCG02G021910 DEMETER CG_Chr02 + View
Cucumis melo MELO3C009432.2 protein ROS1 chr04 - View
Cucumis melo MELO3C012368.2 transcriptional activator DEMETER isoform X1 chr10 + View
Cucumis melo MELO3C024516.2 protein ROS1 chr08 - View
Cucumis melo MELO3C021451.2 protein ROS1-like isoform X1 chr11 + View
Carica papaya Cpa.g.sc128.52 supercontig_128 - View
Capsella rubella Carub.0006s0350 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER scaffold_6 + View
Cucumis sativus L. CsaV3_5G035660 transcriptional activator DEMETER isoform X1 chr5 - View
Cucumis sativus L. CsaV3_6G040410 Transcriptional activator demeter chr6 + View
Cucumis sativus L. CsaV3_6G014730 protein ROS1-like isoform X1 chr6 + View
Daucus carota DCAR_006374 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_017626 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv29423 GWHABJS00000007 - View
Davidia involucrata Dinv20843 GWHABJS00000009 + View
Davidia involucrata Dinv21259 GWHABJS00000021 - View
Davidia involucrata Dinv19826 GWHABJS00000015 + View
Davidia involucrata Dinv30660 GWHABJS00000004 - View
Durio zibethinus Duzib093G0950 NW_019167937.1 - View
Durio zibethinus Duzib114G0475 NW_019167926.1 + View
Erigeron canadensis ECA233G0191 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA238G1134 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.J00426 Chr10 + View
Eucalyptus grandis Eucgr.J01016 Chr10 - View
Eucalyptus grandis Eucgr.A01547 Chr01 + View
Erythranthe guttata Migut.D02337 scaffold_4 + View
Eutrema salsugineum Thhalv10016139m.g PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED scaffold_10 - View
Gossypium hirsutum Gohir.D01G119000 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER D01 + View
Gossypium hirsutum Gohir.A09G136700 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED A09 + View
Gossypium hirsutum Gohir.D09G137800 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED D09 - View
Glycine max Glyma.20G188300 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Gm20 - View
Glycine max Glyma.13G151000 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase Gm13 + View
Glycine max Glyma.10G065900 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED Gm10 + View
Glycine max Glyma.03G190800 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED Gm03 + View
Glycine max Glyma.10G202150 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Gm10 + View
Gossypium raimondii Gorai.009G408300 Chr09 - View
Gossypium raimondii Gorai.002G145100 Chr02 + View
Helianthus annuus HanXRQChr14g0456351 Putative DNA glycosylase; Helix-turn-helix, base-excision DNA repair, C-terminal; Permuted single zf-CXXC unit; Demeter, RRM-fold domain HanXRQChr14 + View
Lupinus albus Lalb_Chr02g0151321 PTHR10359:SF28 - TRANSCRIPTIONAL ACTIVATOR DEMETER Lalb_Chr02 + View
Lotus japonicus Lj5g0003988 PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED chr5 - View
Lotus japonicus Lj5g0026634 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER chr5 - View
Lotus japonicus Lj1g0027290 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase chr1 - View
Lonicera japonica Lj3A932G50 GWHAAZE00000003 + View
Lonicera japonica Lj2A129T52 GWHAAZE00000002 + View
Lonicera japonica Lj3A1003T41 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_2_102681 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase Lsat_1_v8_lg_2 + View
Malus domestica MD07G1071800 demeter-like 1 Chr07 - View
Malus domestica MD02G1245300 HhH-GPD base excision DNA repair family protein Chr02 + View
Malus domestica MD14G1015300 HhH-GPD base excision DNA repair family protein Chr14 + View
Malus domestica MD11G1157400 demeter-like 1 Chr11 + View
Manihot esculenta Manes.08G020500 Chromosome08 + View
Manihot esculenta Manes.09G060800 Chromosome09 - View
Manihot esculenta Manes.04G008900 Chromosome04 - View
Manihot esculenta Manes.10G055200 Chromosome10 + View
Manihot esculenta Manes.07G091800 Chromosome07 - View
Medicago truncatula Medtr1g492760 HhH-GPD base excision DNA repair family protein chr1 + View
Medicago truncatula Medtr7g103680 HhH-GPD base excision DNA repair family protein chr7 + View
Medicago truncatula Medtr2g084845 HhH-GPD base excision DNA repair family protein, putative chr2 + View
Nelumbo nucifera Nn2g13995 chr2 + View
Nicotiana tabacum Nitab4.5_0002259g0070 DNA glycosylase, Endonuclease III-like, iron-sulphur cluster loop motif, HhH-GPD domain, Helix-turn-helix, base-excision DNA repair, C-terminal Nitab4.5_0002259 - View
Olea europaea Oeu059852.1 chr13 - View
Olea europaea Oeu026559.4 scaffold224 + View
Petunia axillaris Peaxi162Scf00244g00044 DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase, putative isoform 5 Peaxi162Scf00244 + View
Punica granatum PGR044G1748 NC_045134.1 - View
Punica granatum PGR119G1632 NC_045132.1 - View
Punica granatum PGR004G0133 NC_045131.1 - View
Prunus persica Prupe.2G089400 PTHR10359:SF28 - TRANSCRIPTIONAL ACTIVATOR DEMETER Pp02 - View
Prunus persica Prupe.6G119100 Pp06 + View
Prunus persica Prupe.7G118000 Pp07 - View
Pisum sativum Psat3g035920 RRM in Demeter chr3LG5 - View
Papaver somniferum PSO339G3200 NC_039366.1 + View
Populus trichocarpa Potri.010G234400 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Chr10 + View
Populus trichocarpa Potri.008G025900 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Chr08 - View
Phaseolus vulgaris Phvul.001G186500 PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED Chr01 + View
Quercus lobata QL04p041091 4 + View
Quercus lobata QL07p040602 7 - View
Rhododendron simsii Rhsim03G0106400 chr03 - View
Rhododendron simsii Rhsim03G0081500 chr03 - View
Rhododendron simsii Rhsim13G0105000 chr13 + View
Striga asiatica SGA_v2.0_scaffold40G15408 scaffold40 - View
Salvia bowleyana SalBow6G6340 GWHASIU00000002 - View
Salix brachista Sabra08G0017600 GWHAAZH00000008 - View
Salix brachista Sabra10G0181700 GWHAAZH00000010 + View
Simmondsia chinensis Sc02g0001140 GWHAASQ00000002 - View
Simmondsia chinensis Sc09g0005580 GWHAASQ00000009 - View
Sechium edule Sed0001020 LG04 + View
Sechium edule Sed0022197 LG07 - View
Sechium edule Sed0011723 LG06 - View
Solanum lycopersicum Solyc11g007580.3 DNA demethylase 3 SL4.0ch11 - View
Schrenkiella parvula Sp6g38200 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER ch6-6 - View
Trochodendron aralioides TAR633G1723 group2 - View
Trochodendron aralioides TAR369G0069 group18 + View
Trochodendron aralioides TAR623G1502 group7 - View
Theobroma cacao Thecc.10G101300 DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase Chromosome_10 + View
Trifolium pratense TPR.G2504 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI63G1581 NC_052240.1 - View
Tripterygium wilfordii TWI77G0704 NC_052236.1 - View
Tripterygium wilfordii TWI38G1634 NC_052252.1 - View
Tripterygium wilfordii TWI53G2113 NC_052244.1 - View
Tripterygium wilfordii TWI79G1587 NC_052238.1 + View
Utricularia gibba unitig_27.g25399 unitig_27 + View
Utricularia gibba unitig_37.g12333 unitig_37 + View
Vaccinium macrocarpon vmacro07222 Similar to DME: Transcriptional activator DEMETER (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0845 CM024071.1 + View
Vigna mungo VMungo1383G2283 CM024070.1 + View
Vitis vinifera GSVIVG01031400001 chr6 + View
Vitis vinifera GSVIVG01034713001 chr13 - View
Vitis vinifera GSVIVG01033777001 chr8 - View