Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0012668 PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera] Chr10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G21680 LG-5 - View
Acer truncatum Atru.chr8.1639 chr8 - View
Acer truncatum Atru.chr3.3382 chr3 - View
Acer truncatum Atru.chr12.965 chr12 + View
Avicennia marina MSTRG.21064 ScioBoG_26769_HRSCAF_26899 - View
Amaranthus hybridus Ah.08g210980 Protein ROS1A (EC 3.2.2.-) (Protein REPRESSOR OF SILENCING 1 homolog a) (Protein ROS1 homolog) (OsROS1) (Protein THICK ALEURONE 2) AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy1G00942 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AM3VD0 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CUT3DD PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K8W5NT PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YBWK9U 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R549UJ PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.66FLD0 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER arahy.Tifrunner.gnm1.Arahy.19 + View
Beta vulgaris EL10Ac7g16995 PF15628//PF15629 - RRM in Demeter (RRM_DME) // Permuted single zf-CXXC unit (Perm-CXXC) Chr7_EL10_PGA_scaffold5 - View
Beta vulgaris EL10Ac9g21080 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED Chr9_EL10_PGA_scaffold8 + View
Cannabis sativa CANSAT54G2606 NC_044375.1 + View
Cannabis sativa CANSAT80G1516 NC_044372.1 + View
Cicer arietinum L. Ca_01678_v3 Ca_LG1_v3 - View
Cicer arietinum L. Ca_10493_v3 Ca_LG4_v3 + View
Corylus avellana Haze_19533 Similar to ROS1A: Protein ROS1A (Oryza sativa subsp. japonica OX%3D39947) 10 + View
Corylus avellana Haze_02614 Similar to DME: Transcriptional activator DEMETER (Arabidopsis thaliana OX%3D3702) 1 - View
Corylus avellana Haze_23450 Similar to ROS1A: Protein ROS1A (Oryza sativa subsp. japonica OX%3D39947) 6 - View
Coffea canephora Cc06_g05230 Putative Repressor of silencing 1 chr6 + View
Coffea canephora Cc02_g10250 Putative uncharacterized protein chr2 - View
Citrus clementina Ciclev10030474m.g scaffold_4 - View
Citrus clementina Ciclev10010892m.g scaffold_6 - View
Citrus clementina Ciclev10027676m.g scaffold_8 - View
Carpinus fangiana Cfa010084 Cfa04 - View
Carpinus fangiana Cfa011221 Cfa04 + View
Carya illinoinensis CiPaw.14G028400 PTHR10359:SF28 - TRANSCRIPTIONAL ACTIVATOR DEMETER Chr14 + View
Carya illinoinensis CiPaw.13G036100 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Chr13 + View
Carya illinoinensis CiPaw.09G008500 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED Chr09 + View
Citrullus lanatus ClCG02G021910 DEMETER CG_Chr02 + View
Citrullus lanatus ClCG04G009770 DEMETER CG_Chr04 + View
Citrullus lanatus ClCG10G019400 Repressor of silencing 1 CG_Chr10 - View
Cucumis melo MELO3C009432.2 protein ROS1 chr04 - View
Cucumis melo MELO3C024516.2 protein ROS1 chr08 - View
Cucumis melo MELO3C021451.2 protein ROS1-like isoform X1 chr11 + View
Carica papaya Cpa.g.sc5.80 supercontig_5 - View
Chenopodium quinoa AUR62038303 ROS1: Protein ROS1 C_Quinoa_Scaffold_2169 + View
Chenopodium quinoa AUR62033581 DME: Transcriptional activator DEMETER C_Quinoa_Scaffold_1776 - View
Chenopodium quinoa AUR62023938 ROS1: Protein ROS1 C_Quinoa_Scaffold_3389 - View
Cucumis sativus L. CsaV3_6G040410 Transcriptional activator demeter chr6 + View
Cucumis sativus L. CsaV3_3G036780 protein ROS1 chr3 + View
Cucumis sativus L. CsaV3_6G014730 protein ROS1-like isoform X1 chr6 + View
Davidia involucrata Dinv29423 GWHABJS00000007 - View
Davidia involucrata Dinv21259 GWHABJS00000021 - View
Davidia involucrata Dinv20843 GWHABJS00000009 + View
Davidia involucrata Dinv19826 GWHABJS00000015 + View
Durio zibethinus Duzib168G1001 NW_019168159.1 - View
Durio zibethinus Duzib093G0950 NW_019167937.1 - View
Eucalyptus grandis Eucgr.J00426 Chr10 + View
Eucalyptus grandis Eucgr.A01547 Chr01 + View
Erythranthe guttata Migut.D02337 scaffold_4 + View
Erythranthe guttata Migut.J00987 scaffold_10 - View
Eutrema salsugineum Thhalv10016139m.g PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED scaffold_10 - View
Fragaria x ananassa FAN09G1539 PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED Fvb6-2 - View
Fragaria x ananassa FAN05G4586 PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED Fvb6-3 - View
Fragaria x ananassa FAN05G3005 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED Fvb6-3 - View
Fragaria x ananassa FAN14G4458 PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED Fvb6-1 + View
Gossypium hirsutum Gohir.D04G104500 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase D04 - View
Gossypium hirsutum Gohir.A09G136700 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED A09 + View
Gossypium hirsutum Gohir.A04G066400 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase A04 - View
Gossypium hirsutum Gohir.D05G086701 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED D05 - View
Gossypium hirsutum Gohir.A05G083800 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED A05 - View
Glycine max Glyma.13G151000 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase Gm13 + View
Glycine max Glyma.20G188300 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Gm20 - View
Glycine max Glyma.10G065900 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED Gm10 + View
Glycine max Glyma.03G190800 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED Gm03 + View
Glycine max Glyma.10G202150 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Gm10 + View
Gossypium raimondii Gorai.006G158300 Chr06 - View
Gossypium raimondii Gorai.009G408300 Chr09 - View
Lotus japonicus Lj1g0027290 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase chr1 - View
Lotus japonicus Lj5g0003988 PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED chr5 - View
Lotus japonicus Lj3g0024881 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase chr3 - View
Lonicera japonica Lj1A221T46 GWHAAZE00000001 + View
Lonicera japonica Lj2A129T52 GWHAAZE00000002 + View
Malus domestica MD11G1157400 demeter-like 1 Chr11 + View
Malus domestica MD14G1015300 HhH-GPD base excision DNA repair family protein Chr14 + View
Malus domestica MD07G1071800 demeter-like 1 Chr07 - View
Malus domestica MD02G1245300 HhH-GPD base excision DNA repair family protein Chr02 + View
Manihot esculenta Manes.10G055200 Chromosome10 + View
Manihot esculenta Manes.09G060800 Chromosome09 - View
Manihot esculenta Manes.04G008900 Chromosome04 - View
Medicago truncatula Medtr1g492760 HhH-GPD base excision DNA repair family protein chr1 + View
Medicago truncatula Medtr7g103680 HhH-GPD base excision DNA repair family protein chr7 + View
Medicago truncatula Medtr2g084845 HhH-GPD base excision DNA repair family protein, putative chr2 + View
Medicago truncatula Medtr1g061220 endonuclease/exonuclease/phosphatase family protein chr1 - View
Nelumbo nucifera Nn2g13995 chr2 + View
Olea europaea Oeu050180.1 chr16 + View
Olea europaea Oeu059852.1 chr13 - View
Punica granatum PGR119G1632 NC_045132.1 - View
Punica granatum PGR004G0133 NC_045131.1 - View
Prunus persica Prupe.2G089400 PTHR10359:SF28 - TRANSCRIPTIONAL ACTIVATOR DEMETER Pp02 - View
Prunus persica Prupe.7G118000 Pp07 - View
Prunus persica Prupe.6G119100 Pp06 + View
Pisum sativum Psat3g035920 RRM in Demeter chr3LG5 - View
Pisum sativum Psat5g254920 RRM in Demeter chr5LG3 + View
Papaver somniferum PSO339G3200 NC_039366.1 + View
Papaver somniferum PSO384G4302 NC_039368.1 - View
Papaver somniferum PSO063G2265 NC_039364.1 + View
Populus trichocarpa Potri.008G025900 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Chr08 - View
Populus trichocarpa Potri.006G116000 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED Chr06 - View
Populus trichocarpa Potri.010G234400 PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Chr10 + View
Phaseolus vulgaris Phvul.007G223600 PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED Chr07 - View
Phaseolus vulgaris Phvul.001G186500 PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED Chr01 + View
Quercus lobata QL07p040602 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0472091 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim13G0105000 chr13 + View
Rhododendron simsii Rhsim03G0081500 chr03 - View
Striga asiatica SGA_v2.0_scaffold40G15408 scaffold40 - View
Striga asiatica SGA_v2.0_scaffold193G40703 scaffold193 - View
Salvia bowleyana SalBow3G3680 GWHASIU00000006 - View
Salix brachista Sabra06G0090700 GWHAAZH00000006 - View
Salix brachista Sabra08G0017600 GWHAAZH00000008 - View
Salix brachista Sabra10G0181700 GWHAAZH00000010 + View
Simmondsia chinensis Sc02g0001140 GWHAASQ00000002 - View
Sechium edule Sed0020277 LG01 + View
Sechium edule Sed0001020 LG04 + View
Solanum lycopersicum Solyc11g007580.3 DNA demethylase 3 SL4.0ch11 - View
Schrenkiella parvula Sp4g18800 PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED ch4-6 - View
Solanum pennellii Sopen11g003420 Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele. | DEMETER (DME) | CONTAINS InterPro DOMAIN/s: DNA glycosylase , Endonuclease III-like, iron-sulphur cluster loop motif , HhH-GPD domain | BEST Arabidopsis thaliana protein match is: demeter-like 1 Spenn-ch11 - View
Solanum pennellii Sopen10g033100 Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele. | DEMETER (DME) | CONTAINS InterPro DOMAIN/s: DNA glycosylase , Endonuclease III-like, iron-sulphur cluster loop motif , HhH-GPD domain | BEST Arabidopsis thaliana protein match is: demeter-like 1 Spenn-ch10 - View
Solanum pennellii Sopen09g003780 Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele. | DEMETER (DME) | CONTAINS InterPro DOMAIN/s: DNA glycosylase , Endonuclease III-like, iron-sulphur cluster loop motif , HhH-GPD domain | BEST Arabidopsis thaliana protein match is: demeter-like 1 Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400002719 Repressor of silencing 1 ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400028264 Repressor of silencing 1 ST4.03ch10 + View
Trochodendron aralioides TAR623G1502 group7 - View
Trochodendron aralioides TAR633G1723 group2 - View
Trochodendron aralioides TAR369G0069 group18 + View
Theobroma cacao Thecc.10G101300 DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase Chromosome_10 + View
Theobroma cacao Thecc.09G291800 HhH-GPD base excision DNA repair family protein Chromosome_9 - View
Theobroma cacao Thecc.05G080600 Repressor of gene silencing 1 Chromosome_5 + View
Tarenaya hassleriana THA.LOC104800557 protein ROS1 isoform X1 NW_010969548.1 - View
Trifolium pratense TPR.G2504 Tp57577_TGAC_v2_LG7 - View
Trifolium pratense TPR.G32369 Tp57577_TGAC_v2_scaf_195 + View
Tripterygium wilfordii TWI79G1587 NC_052238.1 + View
Tripterygium wilfordii TWI75G0699 NC_052253.1 + View
Vaccinium macrocarpon vmacro07222 Similar to DME: Transcriptional activator DEMETER (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G2283 CM024070.1 + View
Vigna mungo VMungo0720G0845 CM024071.1 + View
Vitis vinifera GSVIVG01031400001 chr6 + View
Vitis vinifera GSVIVG01034713001 chr13 - View
Vitis vinifera GSVIVG01033777001 chr8 - View