Functional clusters

Information

  • Type Gene Ontology
  • Description ATPase-dependent activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC06 3 CH_bca_299 9 20 0.000000725269
Brassica carinata ChrC09 3 CH_bca_593 5 5 0.0000862827
Brassica carinata ChrB07 3 CH_bca_735 6 10 0.000267243
Camellia sinensis var. sinensis Chr6 3 CH_camsi_253 9 15 0.000000117558
Capsella rubella scaffold_5 3 CH_cru_69 13 32 0.000000000824169
Eucalyptus grandis Chr09 3 CH_egr_105 16 20 1.36414e-19
Helianthus annuus HanXRQChr07 3 CH_han_554 5 5 0.000154644
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_371 13 63 0.00000243917
Rhododendron simsii chr02 3 CH_rsi_238 10 23 0.000000798377
Sequoiadendron giganteum chr11 3 CH_sgi_1317 9 25 0.000584634
Sequoiadendron giganteum chr3 3 CH_sgi_375 17 45 0.0000000000796726
Selaginella moellendorffii scaffold_18 3 CH_smo_35 14 41 0.0000000187779
Schrenkiella parvula ch1-1 3 CH_spa_126 8 19 0.0000881704
Brassica carinata ChrC06 4 CH_bca_299 9 20 0.000000725269
Brassica carinata ChrC09 4 CH_bca_593 5 5 0.0000862827
Brassica carinata ChrB07 4 CH_bca_735 6 10 0.000267243
Camellia sinensis var. sinensis Chr6 4 CH_camsi_253 9 15 0.000000117558
Capsella rubella scaffold_5 4 CH_cru_69 13 32 0.000000000824169
Eucalyptus grandis Chr09 4 CH_egr_105 16 20 1.36414e-19
Helianthus annuus HanXRQChr07 4 CH_han_554 5 5 0.000154644
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_371 13 63 0.00000243917
Rhododendron simsii chr02 4 CH_rsi_238 10 23 0.000000798377
Sequoiadendron giganteum chr11 4 CH_sgi_1317 9 25 0.000584634
Sequoiadendron giganteum chr3 4 CH_sgi_375 17 45 0.0000000000796726
Selaginella moellendorffii scaffold_18 4 CH_smo_35 14 41 0.0000000187779
Schrenkiella parvula ch1-1 4 CH_spa_126 8 19 0.0000881704

Available child term results

Ontology identifier Description Number of clusters
GO:0003678 DNA helicase activity 4
GO:0003689 DNA clamp loader activity 8
GO:0003724 RNA helicase activity 4
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 14
GO:0004176 ATP-dependent peptidase activity 48
GO:0004386 helicase activity 82
GO:0005388 P-type calcium transporter activity 68
GO:0008551 P-type cadmium transporter activity 2
GO:0008553 P-type proton-exporting transporter activity 10
GO:0008559 ABC-type xenobiotic transporter activity 20
GO:0008569 minus-end-directed microtubule motor activity 2
GO:0008574 plus-end-directed microtubule motor activity 8
GO:0008922 long-chain fatty acid [acyl-carrier-protein] ligase activity 2
GO:0015108 chloride transmembrane transporter activity 6
GO:0015247 aminophospholipid flippase activity 2
GO:0015415 ATPase-coupled phosphate ion transmembrane transporter activity 14
GO:0015431 ABC-type glutathione S-conjugate transporter activity 18
GO:0015444 P-type magnesium transporter activity 4
GO:0015462 ABC-type protein transporter activity 4
GO:0015616 DNA translocase activity 6
GO:0016887 ATP hydrolysis activity 330
GO:0017116 single-stranded DNA helicase activity 4
GO:0019829 ATPase-coupled cation transmembrane transporter activity 22
GO:0031957 very long-chain fatty acid-CoA ligase activity 4
GO:0032574 5'-3' RNA helicase activity 4
GO:0034335 DNA negative supercoiling activity 4
GO:0036310 annealing activity 2
GO:0036402 proteasome-activating activity 6
GO:0042626 ATPase-coupled transmembrane transporter activity 30
GO:0043138 3'-5' DNA helicase activity 18
GO:0043139 5'-3' DNA helicase activity 24
GO:0044604 ABC-type phytochelatin transporter activity 14
GO:0046961 proton-transporting ATPase activity, rotational mechanism 6
GO:0070615 nucleosome-dependent ATPase activity 30
GO:0140326 ATPase-coupled intramembrane lipid transporter activity 10
GO:0140359 ABC-type transporter activity 436

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001