Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p32740 Brassica napus
Aa31LG4G180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.412 Anthoceros agrestis
Actinidia11654 Actinidia chinensis
Actinidia13649 Actinidia chinensis
Actinidia32741 Actinidia chinensis
Ah.01g005490 Amaranthus hybridus
AL2G41670 Arabidopsis lyrata
Aqoxy7G03852 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N295K3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XV1QHH Arachis hypogaea
AT1G79890 Arabidopsis thaliana
ATR0315G151 Amborella trichopoda
Atru.chr1.3309 Acer truncatum
AUR62011631 Chenopodium quinoa
AUR62016462 Chenopodium quinoa
AUR62027729 Chenopodium quinoa
AUR62042934 Chenopodium quinoa
BcaB07g30346 Brassica carinata
BcaC03g17128 Brassica carinata
BolC2t11119H Brassica oleracea
BraA02t08289Z Brassica rapa
C02p50380 Brassica napus
CAN.G395.8 Capsicum annuum
CAN.G395.9 Capsicum annuum
CANSAT25G2226 Cannabis sativa
CARHR074600 Cardamine hirsuta
Carub.0002s2761 Capsella rubella
Ca_20380_v3 Cicer arietinum L.
CBR_g4188 Chara braunii
Cc04_g03190 Coffea canephora
CDE05G0320 Ceratophyllum demersum
Cfa002083 Carpinus fangiana
Ciclev10024822m.g Citrus clementina
CiPaw.01G237600 Carya illinoinensis
ClCG09G002040 Citrullus lanatus
COL.COLO4_30400 Corchorus olitorius
Cpa.g.sc98.25 Carica papaya
Cre07.g322300 Chlamydomonas reinhardtii
CsaV3_7G033300 Cucumis sativus L.
CSS0028336 Camellia sinensis var. sinensis
DCAR_023059 Daucus carota
Dinv30497 Davidia involucrata
ECA232G2923 Erigeron canadensis
EL10Ac9g22016 Beta vulgaris
Eucgr.J02976 Eucalyptus grandis
FAN02G1070 Fragaria x ananassa
FAN05G2003 Fragaria x ananassa
FAN14G4109 Fragaria x ananassa
FvH4_6g31470 Fragaria vesca
Glyma.07G005000 Glycine max
Gohir.A10G080700 Gossypium hirsutum
Gohir.D10G070700 Gossypium hirsutum
Gorai.011G075000 Gossypium raimondii
GSVIVG01017082001 Vitis vinifera
HanXRQChr09g0275171 Helianthus annuus
HanXRQChr17g0552901 Helianthus annuus
Haze_16396 Corylus avellana
Hma1.2p1_1455F.1_g284440 Hydrangea macrophylla
HPP92_023933 Vanilla planifolia
HPP92_023954 Vanilla planifolia
Hund00632 Selenicereus undatus
Lalb_Chr25g0279901 Lupinus albus
Lalb_Chr25g0279911 Lupinus albus
Lj3g0000086 Lotus japonicus
Lj5C59T18 Lonicera japonica
Lsat_1_v5_gn_4_102040 Lactuca sativa
Manes.11G044500 Manihot esculenta
Mapoly0069s0072 Marchantia polymorpha
Mapoly0069s0073 Marchantia polymorpha
MBI01_g06516_MAGBIO Magnolia biondii
MCO04G090 Micromonas commoda
MD09G1210800 Malus domestica
Medtr0147s0060 Medicago truncatula
MELO3C024243.2 Cucumis melo
Migut.I00886 Erythranthe guttata
Migut.I00891 Erythranthe guttata
Nitab4.5_0000351g0070 Nicotiana tabacum
Nitab4.5_0003351g0040 Nicotiana tabacum
Nn2g11737 Nelumbo nucifera
Oeu028167.1 Olea europaea
Os05g0219800 Oryza sativa ssp. japonica
Peaxi162Scf00207g00950 Petunia axillaris
PGR102G3234 Punica granatum
PGSC0003DMG400016505 Solanum tuberosum
Phvul.010G149500 Phaseolus vulgaris
Potri.001G182600 Populus trichocarpa
Pp3c9_5880 Physcomitrium patens
PRCOL_00003432 Prasinoderma coloniale
Prupe.3G069100 Prunus persica
Psat7g250720 Pisum sativum
PSO210G1627 Papaver somniferum
PSO210G2596 Papaver somniferum
QL05p022586 Quercus lobata
RcHm_v2.0_Chr2g0138331 Rosa chinensis
Rhsim08G0222600 Rhododendron simsii
Sabra01G0145000 Salix brachista
Sc21g0005160 Simmondsia chinensis
Sed0020244 Sechium edule
SEGI_14745 Sequoiadendron giganteum
SEGI_15202 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02566 Striga asiatica
SHI10944 Sapria himalayana
SMO232G0121 Selaginella moellendorffii
Solyc06g066670.4 Solanum lycopersicum
Sopen06g024940 Solanum pennellii
Sp5g35880 Schrenkiella parvula
TAR383G0291 Trochodendron aralioides
THA.LOC104800430 Tarenaya hassleriana
Thecc.06G090600 Theobroma cacao
Thhalv10019547m.g Eutrema salsugineum
TPR.G17686 Trifolium pratense
TWI12G0301 Tripterygium wilfordii
unitig_744.g24445 Utricularia gibba
vmacro18898 Vaccinium macrocarpon
VMungo0331G0958 Vigna mungo
Zm00001eb284740 Zea mays

User provided reference genes

Program Settings