Gene: Solyc06g066670.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g066670.4
  • Transcript Identifier Solyc06g066670.4.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 39525723-39532108 : positive

Gene Family Information

  • ID HOM05D001537
  • #Genes/#Species 414/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g066670.4.1
  • uniprot A0A3Q7GZL3
  • gene_id Solyc06g066670

Descriptions

  • Description RNA helicase DEAH-box20
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034085
IBA
GOA Databaseestablishment of sister chromatid cohesion
GO:0032508
IBA
GOA DatabaseDNA duplex unwinding
GO:0006139
IEA
GOA Databasenucleobase-containing compound metabolic process
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0016070
IDA
Gene OntologyRNA metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003678
IBA
IEA
GOA DatabaseDNA helicase activity
GO:0003678
IEA
InterProDNA helicase activity
GO:0016818
IEA
GOA Databasehydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016818
IEA
InterProhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003724
IDA
Gene OntologyRNA helicase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028331 ATP-dependent RNA helicase CHL1/DDX11
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR045028 Helicase superfamily 1/2, DinG/Rad3-like
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR006554 Helicase-like, DEXD box c2 type
IPR006555 ATP-dependent helicase, C-terminal
IPR013020 ATP-dependent helicase Rad3/Chl1-like
IPR010614 DEAD2
Mapman id Description
35.1 not assigned.annotated