Gene: vmacro18898

General Information

Structural Information

Species Vaccinium macrocarpon
Gene Identifier vmacro18898
Transcript Identifier vmacro18898-RA
Gene Type Coding gene
Location chr5_Vaccinium_macrocarpon_Stevens_v1 : 2090847-2095480 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001537
#Genes/#Species 414/100
Phylogenetic origin

ID ORTHO05D008612
#Genes/#Species 117/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id vmacro18898_Vaccinium_macrocarpon_Stevens_v1

Descriptions

Short descriptions
Ortholog descriptions

Description Similar to ddx11: ATP-dependent DNA helicase DDX11 (Danio rerio OX=7955)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006139	IEA	InterPro	nucleobase-containing compound metabolic process
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc06g066670.4

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003678	IEA	InterPro	DNA helicase activity
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0004386	IEA	InterPro	helicase activity
GO:0005524	IEA	InterPro	ATP binding
GO:0016818	IEA	InterPro	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003677	IEA	InterPro	DNA binding
GO:0003724	ISO	PLAZA Integrative Orthology	RNA helicase activity	Solyc06g066670.4

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR045028	Helicase superfamily 1/2, DinG/Rad3-like
IPR013020	ATP-dependent helicase Rad3/Chl1-like
IPR006555	ATP-dependent helicase, C-terminal
IPR028331	ATP-dependent RNA helicase CHL1/DDX11
IPR010614	DEAD2
IPR006554	Helicase-like, DEXD box c2 type

Mapman id	Description
35.1	not assigned.annotated