Gene: Sp5g35880

General Information

Structural Information

Species Schrenkiella parvula
Gene Identifier Sp5g35880
Transcript Identifier Sp5g35880.1
Gene Type Coding gene
Location ch5-7 : 2806063-2809527 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001537
#Genes/#Species 414/100
Phylogenetic origin

ID ORTHO05D008612
#Genes/#Species 117/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Sp5g35880.v2.2
pacid 45097567

Descriptions

Short descriptions
Ortholog descriptions

Description K11273 - chromosome transmission fidelity protein 1 [EC:3.6.4.13] (DDX11, CHL1, CTF1)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006139	IEA	InterPro	nucleobase-containing compound metabolic process
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc06g066670.4

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003678	IEA	InterPro	DNA helicase activity
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0004386	IEA	InterPro	helicase activity
GO:0005524	IEA	InterPro	ATP binding
GO:0016818	IEA	InterPro	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003677	IEA	InterPro	DNA binding
GO:0003724	ISO	PLAZA Integrative Orthology	RNA helicase activity	Solyc06g066670.4

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR013020	ATP-dependent helicase Rad3/Chl1-like
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR006555	ATP-dependent helicase, C-terminal
IPR028331	ATP-dependent RNA helicase CHL1/DDX11
IPR006554	Helicase-like, DEXD box c2 type
IPR045028	Helicase superfamily 1/2, DinG/Rad3-like
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR010614	DEAD2

Mapman id	Description
35.1	not assigned.annotated