Gene: Nitab4.5_0000351g0070
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0000351g0070
- Transcript Identifier Nitab4.5_0000351g0070.1
- Gene Type Coding gene
- Location Nitab4.5_0000351 : 353418-359916 : positive
Gene Family Information
- ID HOM05D001537
- #Genes/#Species 414/100
- Phylogenetic origin
- ID ORTHO05D008612
- #Genes/#Species 117/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0000351g0070.1
- SR1-identifier Nta12g10130.1
Descriptions
- Description Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type, ATP-dependent RNA helicase CHL1, Helicase-like, DEXD box c2 type, ATP-dependent helicase, C-terminal, DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site, DEAD2, DNA helicase (DNA repair), Rad3 type, P-loop containing nucleoside triphosphate hydrolase, Helicase, superfamily 1/2, ATP-binding domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process | |
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc06g066670.4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003678 | IEA | InterPro | DNA helicase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0016818 | IEA | InterPro | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | |
| GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc06g066670.4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR010614 | DEAD2 |
| IPR045028 | Helicase superfamily 1/2, DinG/Rad3-like |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR006555 | ATP-dependent helicase, C-terminal |
| IPR028331 | ATP-dependent RNA helicase CHL1/DDX11 |
| IPR006554 | Helicase-like, DEXD box c2 type |
| IPR013020 | ATP-dependent helicase Rad3/Chl1-like |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |