Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p06760 Brassica napus
A05p25150 Brassica napus
A08p01120 Brassica napus
A10p18920 Brassica napus
Aa31LG1G13620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2161 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5227 Anthoceros agrestis
Actinidia06991 Actinidia chinensis
Actinidia24477 Actinidia chinensis
Ah.01g014660 Amaranthus hybridus
AL6G32780 Arabidopsis lyrata
Aqoxy1G00101 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DIB5MP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LSK0UK Arachis hypogaea
AT5G21160 Arabidopsis thaliana
ATR0307G062 Amborella trichopoda
Atru.chr3.2884 Acer truncatum
AUR62025106 Chenopodium quinoa
AUR62037158 Chenopodium quinoa
BcaB05g22768 Brassica carinata
BcaB08g36479 Brassica carinata
BcaC03g13841 Brassica carinata
BcaC04g19520 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01060 Brassica napus
BolC2t07110H Brassica oleracea
BolC7t40905H Brassica oleracea
BolC9t58351H Brassica oleracea
BraA02t05622Z Brassica rapa
BraA06t26086Z Brassica rapa
BraA08t33357Z Brassica rapa
BraA10t43969Z Brassica rapa
C07p05070 Brassica napus
C09p54900 Brassica napus
CAN.G65.193 Capsicum annuum
CANSAT54G1858 Cannabis sativa
CARHR191710 Cardamine hirsuta
Carub.0006s1947 Capsella rubella
Ca_06162_v3 Cicer arietinum L.
CBR_g40192 Chara braunii
Cc01_g06920 Coffea canephora
CDE04G2270 Ceratophyllum demersum
CDE07G1662 Ceratophyllum demersum
Cfa010270 Carpinus fangiana
Ciclev10014180m.g Citrus clementina
CiPaw.13G121400 Carya illinoinensis
ClCG02G024230 Citrullus lanatus
COL.COLO4_18350 Corchorus olitorius
Cpa.g.sc34.222 Carica papaya
Cpa.g.sc34.223 Carica papaya
Cre10.g441200 Chlamydomonas reinhardtii
CsaV3_4G017360 Cucumis sativus L.
CSS0006132 Camellia sinensis var. sinensis
DCAR_028376 Daucus carota
Dinv10718 Davidia involucrata
Dinv10719 Davidia involucrata
Dinv24006 Davidia involucrata
Duzib168G0566 Durio zibethinus
Duzib168G1535 Durio zibethinus
Duzib168G1575 Durio zibethinus
Duzib168G1797 Durio zibethinus
Duzib170G0755 Durio zibethinus
ECA238G0666 Erigeron canadensis
EL10Ac9g22356 Beta vulgaris
Eucgr.B03778 Eucalyptus grandis
FAN07G1992 Fragaria x ananassa
FAN11G3590 Fragaria x ananassa
FAN16G3163 Fragaria x ananassa
FAN21G2026 Fragaria x ananassa
FAN25G2397 Fragaria x ananassa
FAN25G3724 Fragaria x ananassa
FvH4_3g27710 Fragaria vesca
Glyma.02G275300 Glycine max
Glyma.14G040900 Glycine max
Gohir.A03G034600 Gossypium hirsutum
Gohir.A05G101900 Gossypium hirsutum
Gohir.D03G133700 Gossypium hirsutum
Gohir.D05G101600 Gossypium hirsutum
Gorai.003G140800 Gossypium raimondii
Gorai.009G105800 Gossypium raimondii
GSVIVG01029892001 Vitis vinifera
GSVIVG01037494001 Vitis vinifera
HanXRQChr06g0180661 Helianthus annuus
Haze_23682 Corylus avellana
Hma1.2p1_1632F.1_g294685 Hydrangea macrophylla
HPP92_028183 Vanilla planifolia
Hund08090 Selenicereus undatus
Lalb_Chr04g0249621 Lupinus albus
Lalb_Chr17g0347591 Lupinus albus
Lj1A247T60 Lonicera japonica
Lj1C272T10 Lonicera japonica
LjContig00564g0003968 Lotus japonicus
Lsat_1_v5_gn_2_38521 Lactuca sativa
Manes.05G195600 Manihot esculenta
Mapoly0082s0081 Marchantia polymorpha
MBI19_g06402_MAGBIO Magnolia biondii
MBI19_g07017_MAGBIO Magnolia biondii
MCO09G615 Micromonas commoda
MD00G1106400 Malus domestica
MD11G1175800 Malus domestica
MD11G1176000 Malus domestica
MD11G1183000 Malus domestica
Medtr5g027770 Medicago truncatula
Medtr5g027780 Medicago truncatula
Medtr5g088005 Medicago truncatula
Medtr5g088060 Medicago truncatula
Medtr5g088200 Medicago truncatula
Medtr5g488160 Medicago truncatula
MELO3C014708.2 Cucumis melo
Migut.D00698 Erythranthe guttata
Migut.N02395 Erythranthe guttata
MSTRG.12429 Avicennia marina
MSTRG.17645 Avicennia marina
Nitab4.5_0002368g0120 Nicotiana tabacum
Nitab4.5_0010831g0020 Nicotiana tabacum
Nitab4.5_0010831g0040 Nicotiana tabacum
Nn7g37238 Nelumbo nucifera
Oeu025934.1 Olea europaea
Oeu032039.2 Olea europaea
Os01g0266000 Oryza sativa ssp. japonica
Peaxi162Scf00355g00111 Petunia axillaris
Peaxi162Scf00973g00315 Petunia axillaris
PGR102G0053 Punica granatum
Phvul.008G206300 Phaseolus vulgaris
Potri.001G220100 Populus trichocarpa
Potri.009G018100 Populus trichocarpa
Pp3c11_24960 Physcomitrium patens
Pp3c7_8450 Physcomitrium patens
Prupe.6G155800 Prunus persica
Psat2g021800 Pisum sativum
PSO339G4393 Papaver somniferum
PSO384G3024 Papaver somniferum
QL01p007505 Quercus lobata
RcHm_v2.0_Chr5g0050001 Rosa chinensis
Rhsim13G0202000 Rhododendron simsii
Sabra09G0010600 Salix brachista
SalBow3G3618 Salvia bowleyana
SalBow6G5099 Salvia bowleyana
Sc21g0000250 Simmondsia chinensis
Sed0000524 Sechium edule
Sed0024490 Sechium edule
SEGI_14698 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12156 Striga asiatica
SGA_v2.0_scaffold79G25564 Striga asiatica
SMO119G0028 Selaginella moellendorffii
Solyc06g073550.3 Solanum lycopersicum
Sopen06g029910 Solanum pennellii
Sp6g23360 Schrenkiella parvula
TAR636G0566 Trochodendron aralioides
THA.LOC104810960 Tarenaya hassleriana
THA.LOC104815093 Tarenaya hassleriana
Thecc.09G338800 Theobroma cacao
Thhalv10012690m.g Eutrema salsugineum
TPR.G11306 Trifolium pratense
TWI31G1498 Tripterygium wilfordii
TWI79G0397 Tripterygium wilfordii
unitig_22.g5688 Utricularia gibba
unitig_22.g6183 Utricularia gibba
vmacro04099 Vaccinium macrocarpon
VMungo0647G0819 Vigna mungo
Zm00001eb333210 Zea mays

User provided reference genes

Program Settings