Gene: Pp3c11_24960
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c11_24960
- Transcript Identifier Pp3c11_24960V3.2
- Gene Type Coding gene
- Location Chr11 : 16285424-16293059 : negative
Gene Family Information
- ID HOM05D001076
- #Genes/#Species 569/99
- Phylogenetic origin
- ID ORTHO05D005313
- #Genes/#Species 160/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c11_24960V3.2
- pacid 32958086
- alias Pp1s138_131V6
- alias Phpat.011G099000
- uniprot A0A2K1JW63
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010286 | ISO | PLAZA Integrative Orthology | heat acclimation | AT5G21160 |
GO:0061014 | ISO | PLAZA Integrative Orthology | positive regulation of mRNA catabolic process | AT5G21160 |
GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT4G35890 |
GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT4G35890 |
GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT4G35890 |
GO:0006402 | ISO | PLAZA Integrative Orthology | mRNA catabolic process | AT5G21160 |
GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT4G35890 |
GO:0070370 | ISO | PLAZA Integrative Orthology | cellular heat acclimation | AT5G21160 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003723 | IEA | GOA Database | RNA binding | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G21160 |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G35890 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010494 | ISO | PLAZA Integrative Orthology | cytoplasmic stress granule | AT5G21160 |
GO:0000932 | ISO | PLAZA Integrative Orthology | P-body | AT5G21160 |
GO:0005844 | ISO | PLAZA Integrative Orthology | polysome | AT5G21160 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G35890 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G21160 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
16.4.2.4 | RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.XRN4-exoribonuclease cofactor (LARP1) |