Gene: Os01g0266000

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os01g0266000
  • Transcript Identifier Os01t0266000-01
  • Gene Type Coding gene
  • Location chr01 : 9074973-9083490 : positive

Gene Family Information

  • ID HOM05D001076
  • #Genes/#Species 569/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os01t0266000-01
  • MSU-ID LOC_Os01g16110.2
  • MSU-ID LOC_Os01g16110.1
  • uniprot Q5NBG8

Descriptions

  • Description RNA-binding protein Lupus La domain containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070370
IEA
GOA Databasecellular heat acclimation
GO:0010286
ISO
PLAZA Integrative Orthologyheat acclimation AT5G21160
GO:0061014
ISO
PLAZA Integrative Orthologypositive regulation of mRNA catabolic process AT5G21160
GO:0006402
ISO
PLAZA Integrative OrthologymRNA catabolic process AT5G21160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G21160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000932
IEA
GOA DatabaseP-body
GO:0005829
IEA
GOA Databasecytosol
GO:0005634
IEA
GOA Databasenucleus
GO:0010494
IEA
GOA Databasecytoplasmic stress granule
GO:0005844
ISO
PLAZA Integrative Orthologypolysome AT5G21160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR006630 La-type HTH domain
IPR006607 Protein of unknown function DM15
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
16.4.2.4 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.XRN4-exoribonuclease cofactor (LARP1)