Gene: C09p54900

General Information

Structural Information

  • Species Brassica napus
  • Gene Identifier C09p54900
  • Transcript Identifier C09p54900
  • Gene Type Coding gene
  • Location C09 : 53733392-53738002 : positive

Gene Family Information

  • ID HOM05D001076
  • #Genes/#Species 569/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid C09p54900.1_BnaDAR
  • v5 BnaC09g36770D
  • single_cell_id C09p54900.1-BnaDAR
  • ensembl GSBRNA2T00094404001

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010286
ISO
PLAZA Integrative Orthologyheat acclimation AT5G21160
GO:0061014
ISO
PLAZA Integrative Orthologypositive regulation of mRNA catabolic process AT5G21160
GO:0070370
ISO
PLAZA Integrative Orthologycellular heat acclimation AT5G21160
GO:0006402
ISO
PLAZA Integrative OrthologymRNA catabolic process AT5G21160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G21160
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G21160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005844
ISO
PLAZA Integrative Orthologypolysome AT5G21160
GO:0010494
ISO
PLAZA Integrative Orthologycytoplasmic stress granule AT5G21160
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT5G21160
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G21160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006630 La-type HTH domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR006607 Protein of unknown function DM15
Mapman id Description
16.4.2.4 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.XRN4-exoribonuclease cofactor (LARP1)