Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43050 Brassica napus
Aa31LG1G17970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5819 Anthoceros agrestis
Actinidia20028 Actinidia chinensis
Actinidia20029 Actinidia chinensis
Ah.06g191020 Amaranthus hybridus
AL8G41160 Arabidopsis lyrata
Aqoxy5G02289 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K5KUZ3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XVSB6Y Arachis hypogaea
AT5G63920 Arabidopsis thaliana
ATR1001G007 Amborella trichopoda
Atru.chr4.980 Acer truncatum
AUR62000512 Chenopodium quinoa
AUR62006857 Chenopodium quinoa
BcaB07g29709 Brassica carinata
BcaB08g34438 Brassica carinata
BcaC03g18232 Brassica carinata
BolC1t01713H Brassica oleracea
BolC2t12375H Brassica oleracea
BraA02t09226Z Brassica rapa
BraA03t15260Z Brassica rapa
C01p17790 Brassica napus
C02p63010 Brassica napus
C04p33650 Brassica napus
CAN.G163.2 Capsicum annuum
CANSAT01G2275 Cannabis sativa
CARHR277840 Cardamine hirsuta
Carub.0008s2470 Capsella rubella
Ca_16971_v3 Cicer arietinum L.
Ca_16979_v3 Cicer arietinum L.
CBR_g74 Chara braunii
CBR_g74987 Chara braunii
Cc07_g19240 Coffea canephora
Cc07_g20290 Coffea canephora
Cc07_g20300 Coffea canephora
CDE09G0651 Ceratophyllum demersum
CDE09G0788 Ceratophyllum demersum
Cfa002178 Carpinus fangiana
Cfa022087 Carpinus fangiana
Ciclev10003112m.g Citrus clementina
CiPaw.04G079900 Carya illinoinensis
ClCG10G017010 Citrullus lanatus
COL.COLO4_33656 Corchorus olitorius
COL.COLO4_35815 Corchorus olitorius
Cpa.g.sc37.4 Carica papaya
CsaV3_3G039390 Cucumis sativus L.
CSS0026830 Camellia sinensis var. sinensis
CSS0039016 Camellia sinensis var. sinensis
CSS0041549 Camellia sinensis var. sinensis
CSS0042552 Camellia sinensis var. sinensis
DCAR_023889 Daucus carota
Dinv35485 Davidia involucrata
Duzib264G0915 Durio zibethinus
ECA248G2894 Erigeron canadensis
EL10Ac4g09621 Beta vulgaris
Eucgr.H05141 Eucalyptus grandis
FAN19G2097 Fragaria x ananassa
FAN23G2071 Fragaria x ananassa
FAN23G2830 Fragaria x ananassa
FAN26G0537 Fragaria x ananassa
FAN26G1134 Fragaria x ananassa
FAN26G3457 Fragaria x ananassa
FvH4_1g24710 Fragaria vesca
Glyma.06G155600 Glycine max
Gohir.A11G057650 Gossypium hirsutum
Gohir.A11G057700 Gossypium hirsutum
Gohir.D11G061900 Gossypium hirsutum
Gorai.007G066700 Gossypium raimondii
GSVIVG01026459001 Vitis vinifera
GSVIVG01026461001 Vitis vinifera
HanXRQChr01g0016911 Helianthus annuus
HanXRQChr01g0016921 Helianthus annuus
HanXRQChr02g0037311 Helianthus annuus
HanXRQChr06g0165731 Helianthus annuus
HanXRQChr16g0517731 Helianthus annuus
HanXRQChr16g0517741 Helianthus annuus
Haze_25330 Corylus avellana
Haze_25331 Corylus avellana
Haze_26976 Corylus avellana
Hma1.2p1_2528F.1_g323950 Hydrangea macrophylla
HPP92_005917 Vanilla planifolia
HPP92_005922 Vanilla planifolia
HPP92_005923 Vanilla planifolia
HPP92_005924 Vanilla planifolia
Hund21801 Selenicereus undatus
Lalb_Chr11g0068591 Lupinus albus
Lj1g0008046 Lotus japonicus
Lj4C830T7 Lonicera japonica
Lsat_1_v5_gn_1_78841 Lactuca sativa
Manes.13G078050 Manihot esculenta
Mapoly0113s0011 Marchantia polymorpha
MBI07_g33104_MAGBIO Magnolia biondii
MBI07_g43314_MAGBIO Magnolia biondii
MBI07_g47060_MAGBIO Magnolia biondii
MBI07_g47157_MAGBIO Magnolia biondii
MCO11G433 Micromonas commoda
MD15G1134700 Malus domestica
Medtr3g096640 Medicago truncatula
Medtr5g061930 Medicago truncatula
Medtr5g061940 Medicago truncatula
MELO3C009682.2 Cucumis melo
Migut.H00785 Erythranthe guttata
Migut.H00803 Erythranthe guttata
Nitab4.5_0000120g0160 Nicotiana tabacum
Nitab4.5_0000120g0170 Nicotiana tabacum
Nitab4.5_0001277g0010 Nicotiana tabacum
Nitab4.5_0001277g0020 Nicotiana tabacum
Nitab4.5_0001277g0030 Nicotiana tabacum
Nitab4.5_0001277g0040 Nicotiana tabacum
Nn5g28440 Nelumbo nucifera
Oeu050090.2 Olea europaea
Os03g0165000 Oryza sativa ssp. japonica
Peaxi162Scf00151g00065 Petunia axillaris
Peaxi162Scf00151g00069 Petunia axillaris
Peaxi162Scf00151g00610 Petunia axillaris
PGR102G1182 Punica granatum
PGSC0003DMG401017464 Solanum tuberosum
PGSC0003DMG402017464 Solanum tuberosum
Phvul.009G154850 Phaseolus vulgaris
Potri.005G067100 Populus trichocarpa
Pp3c21_9710 Physcomitrium patens
Pp3s46_350 Physcomitrium patens
PRCOL_00003192 Prasinoderma coloniale
Prupe.4G275500 Prunus persica
Psat5g060640 Pisum sativum
PSO170G3411 Papaver somniferum
PSO384G2582 Papaver somniferum
PSO443G0075 Papaver somniferum
PSO541G4120 Papaver somniferum
PSO782G2357 Papaver somniferum
QL04p089617 Quercus lobata
QL10p041326 Quercus lobata
RcHm_v2.0_Chr2g0122231 Rosa chinensis
RcHm_v2.0_Chr7g0229331 Rosa chinensis
Rhsim10G0124100 Rhododendron simsii
Rhsim10G0124200 Rhododendron simsii
Sabra05G0055200 Salix brachista
Sabra09G0025500 Salix brachista
Sabra11G0021400 Salix brachista
Sabra14G0026900 Salix brachista
Sabra14G0091800 Salix brachista
Sabra16G0195800 Salix brachista
Sc16g0009510 Simmondsia chinensis
Sed0010212 Sechium edule
SEGI_15758 Sequoiadendron giganteum
SEGI_16368 Sequoiadendron giganteum
SEGI_35171 Sequoiadendron giganteum
SEGI_40414 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19590 Striga asiatica
SHI11490 Sapria himalayana
SHI36070 Sapria himalayana
SHI36071 Sapria himalayana
SHI36072 Sapria himalayana
SMO114G0082 Selaginella moellendorffii
Solyc05g014720.4 Solanum lycopersicum
Solyc05g014730.1 Solanum lycopersicum
Solyc05g014740.1 Solanum lycopersicum
Solyc05g014750.2 Solanum lycopersicum
Sopen05g009910 Solanum pennellii
Sp2g26990 Schrenkiella parvula
TAR376G0522 Trochodendron aralioides
THA.LOC104818422 Tarenaya hassleriana
Thecc.01G137400 Theobroma cacao
Thhalv10003618m.g Eutrema salsugineum
TPR.G33581 Trifolium pratense
TWI79G1433 Tripterygium wilfordii
unitig_62.g23374 Utricularia gibba
unitig_62.g23375 Utricularia gibba
vmacro12743 Vaccinium macrocarpon
vmacro12744 Vaccinium macrocarpon
vmacro12745 Vaccinium macrocarpon
VMungo1309G0220 Vigna mungo
Zm00001eb005010 Zea mays

User provided reference genes

Program Settings