Gene: PGSC0003DMG402017464

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG402017464
  • Transcript Identifier PGSC0003DMT400045040
  • Gene Type Coding gene
  • Location ST4.03ch05 : 12265137-12267931 : negative

Gene Family Information

  • ID HOM05D002182
  • #Genes/#Species 307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37445435
  • id PGSC0003DMG402017464.v4.03
  • uniprot M1BH01

Descriptions

  • Description DNA topoisomerase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006265
IBA
IEA
GOA DatabaseDNA topological change
GO:0006265
IEA
InterProDNA topological change
GO:0000278
ISO
PLAZA Integrative Orthologymitotic cell cycle AT5G63920
GO:0007059
ISO
PLAZA Integrative Orthologychromosome segregation AT5G63920
GO:0000712
ISO
PLAZA Integrative Orthologyresolution of meiotic recombination intermediates AT5G63920
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT5G63920
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT5G63920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003916
IBA
IEA
GOA DatabaseDNA topoisomerase activity
GO:0003916
IEA
InterProDNA topoisomerase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0003917
IEA
GOA DatabaseDNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0003917
IEA
InterProDNA topoisomerase type I (single strand cut, ATP-independent) activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003601 DNA topoisomerase, type IA, domain 2
IPR013824 DNA topoisomerase, type IA, central region, subdomain 1
IPR023405 DNA topoisomerase, type IA, core domain
IPR006171 TOPRIM domain
IPR013497 DNA topoisomerase, type IA, central
IPR000380 DNA topoisomerase, type IA
Mapman id Description
35.1 not assigned.annotated