Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p25940 Brassica napus
A09p38030 Brassica napus
Aa31sc146G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.140 Anthoceros agrestis
Actinidia02998 Actinidia chinensis
Actinidia38222 Actinidia chinensis
Ah.10g033320 Amaranthus hybridus
AL1G41570 Arabidopsis lyrata
AL5G37210 Arabidopsis lyrata
Aqoxy1G01978 Aquilegia oxysepala
Aqoxy2G01568 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.59ZZV8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YKFK84 Arachis hypogaea
AT1G28060 Arabidopsis thaliana
AT3G55930 Arabidopsis thaliana
ATR0580G275 Amborella trichopoda
Atru.chr12.588 Acer truncatum
Atru.chr12.590 Acer truncatum
AUR62025537 Chenopodium quinoa
AUR62042671 Chenopodium quinoa
BcaC01g00003 Brassica carinata
BcaC05g26621 Brassica carinata
BcaC05g26809 Brassica carinata
BolC3t19719H Brassica oleracea
BolC5t31397H Brassica oleracea
BraA08t34545Z Brassica rapa
BraA09t39313Z Brassica rapa
C03p74710 Brassica napus
C05p26730 Brassica napus
CAN.G28.18 Capsicum annuum
CAN.G348.4 Capsicum annuum
CAN.G546.16 Capsicum annuum
CANSAT78G1625 Cannabis sativa
CARHR027510 Cardamine hirsuta
Carub.0001s2649 Capsella rubella
Carub.0005s2292 Capsella rubella
Ca_11321_v3 Cicer arietinum L.
CBR_g41418 Chara braunii
Cc02_g08600 Coffea canephora
CDE10G0582 Ceratophyllum demersum
CDE10G0729 Ceratophyllum demersum
Cfa001556 Carpinus fangiana
Cfa024969 Carpinus fangiana
Ciclev10030694m.g Citrus clementina
CiPaw.01G280100 Carya illinoinensis
CiPaw.02G178700 Carya illinoinensis
ClCG02G013660 Citrullus lanatus
COL.COLO4_10868 Corchorus olitorius
Cpa.g.sc1.306 Carica papaya
Cre09.g416000 Chlamydomonas reinhardtii
CsaV3_5G006530 Cucumis sativus L.
CSS0040311 Camellia sinensis var. sinensis
CSS0050146 Camellia sinensis var. sinensis
DCAR_027695 Daucus carota
Dinv31391 Davidia involucrata
Duzib114G0430 Durio zibethinus
Duzib114G0987 Durio zibethinus
Duzib128G1511 Durio zibethinus
ECA233G1939 Erigeron canadensis
ECA234G2610 Erigeron canadensis
EL10Ac2g03490 Beta vulgaris
Eucgr.G02772 Eucalyptus grandis
FAN01G1069 Fragaria x ananassa
FAN01G1115 Fragaria x ananassa
FAN01G1323 Fragaria x ananassa
FAN03G1537 Fragaria x ananassa
FAN06G1239 Fragaria x ananassa
FAN06G3924 Fragaria x ananassa
FAN10G3079 Fragaria x ananassa
FAN25G2354 Fragaria x ananassa
FvH4_2g04410 Fragaria vesca
FvH4_7g20820 Fragaria vesca
Glyma.01G229700 Glycine max
Glyma.11G012500 Glycine max
Glyma.20G241900 Glycine max
Gohir.A06G177800 Gossypium hirsutum
Gohir.A10G209800 Gossypium hirsutum
Gohir.D06G173600 Gossypium hirsutum
Gohir.D10G218100 Gossypium hirsutum
Gorai.010G203000 Gossypium raimondii
Gorai.011G244700 Gossypium raimondii
GSVIVG01032624001 Vitis vinifera
HanXRQChr15g0482981 Helianthus annuus
HanXRQChr16g0532861 Helianthus annuus
Haze_16975 Corylus avellana
Hma1.2p1_0207F.1_g087910 Hydrangea macrophylla
HPP92_019592 Vanilla planifolia
Hund22428 Selenicereus undatus
Hund22429 Selenicereus undatus
Lalb_Chr02g0143891 Lupinus albus
Lalb_Chr21g0307191 Lupinus albus
Lj1A929G70 Lonicera japonica
Lj2C863G7 Lonicera japonica
Lj5g0014436 Lotus japonicus
Lsat_1_v5_gn_3_65860 Lactuca sativa
Lsat_1_v5_gn_6_55440 Lactuca sativa
Manes.07G106800 Manihot esculenta
Manes.10G038800 Manihot esculenta
Mapoly0014s0207 Marchantia polymorpha
MBI05_g32633_MAGBIO Magnolia biondii
MD01G1117500 Malus domestica
MD07G1185000 Malus domestica
Medtr1g115920 Medicago truncatula
Medtr4g094355 Medicago truncatula
Medtr5g039050 Medicago truncatula
Medtr5g039100 Medicago truncatula
MELO3C001113.2 Cucumis melo
MELO3C023809.2 Cucumis melo
MELO3C027942.2 Cucumis melo
MELO3C028130.2 Cucumis melo
MELO3C033159.2 Cucumis melo
MELO3C033720.2 Cucumis melo
Migut.F00813 Erythranthe guttata
Nitab4.5_0012104g0020 Nicotiana tabacum
Nitab4.5_0022203g0010 Nicotiana tabacum
Nn2g10548 Nelumbo nucifera
Oeu009483.1 Olea europaea
Oeu009484.1 Olea europaea
Oeu009485.1 Olea europaea
Oeu039037.3 Olea europaea
Os09g0249600 Oryza sativa ssp. japonica
Peaxi162Scf00015g02612 Petunia axillaris
PGR142G0268 Punica granatum
PGSC0003DMG400002376 Solanum tuberosum
PGSC0003DMG400023507 Solanum tuberosum
Phvul.002G037600 Phaseolus vulgaris
Phvul.007G008300 Phaseolus vulgaris
Potri.008G048000 Populus trichocarpa
Potri.010G213300 Populus trichocarpa
Pp3c14_26820 Physcomitrium patens
PRCOL_00003477 Prasinoderma coloniale
Prupe.2G224900 Prunus persica
Prupe.6G042200 Prunus persica
Psat5g261640 Pisum sativum
Psat6g163840 Pisum sativum
Psat6g240760 Pisum sativum
PSO275G0001 Papaver somniferum
PSO541G5925 Papaver somniferum
PSO675G6375 Papaver somniferum
QL08p057653 Quercus lobata
RcHm_v2.0_Chr1g0365041 Rosa chinensis
Rhsim03G0125400 Rhododendron simsii
Rhsim09G0156000 Rhododendron simsii
Sabra08G0034200 Salix brachista
Sabra10G0165100 Salix brachista
SalBow3G0936 Salvia bowleyana
SalBow8G1202 Salvia bowleyana
Sc06g0001860 Simmondsia chinensis
Sed0009358 Sechium edule
Sed0012201 Sechium edule
SEGI_10080 Sequoiadendron giganteum
SEGI_11595 Sequoiadendron giganteum
SEGI_36215 Sequoiadendron giganteum
SGA_v2.0_scaffold221G42698 Striga asiatica
SGA_v2.0_scaffold2G01039 Striga asiatica
SMO340G0141 Selaginella moellendorffii
Solyc05g054870.3 Solanum lycopersicum
Solyc05g054880.3 Solanum lycopersicum
Solyc06g036580.4 Solanum lycopersicum
Sopen05g033340 Solanum pennellii
Sopen06g008290 Solanum pennellii
Sp1g24240 Schrenkiella parvula
TAR320G0003 Trochodendron aralioides
TAR623G1133 Trochodendron aralioides
THA.LOC104827309 Tarenaya hassleriana
Thecc.10G062100 Theobroma cacao
Thhalv10006834m.g Eutrema salsugineum
TPR.G10418 Trifolium pratense
TPR.G11535 Trifolium pratense
TPR.G27039 Trifolium pratense
TPR.G27067 Trifolium pratense
TPR.G27107 Trifolium pratense
TPR.G30178 Trifolium pratense
TPR.G40489 Trifolium pratense
TPR.G4996 Trifolium pratense
TWI38G0009 Tripterygium wilfordii
unitig_32.g10676 Utricularia gibba
unitig_88.g27762 Utricularia gibba
unitig_88.g27763 Utricularia gibba
vmacro07110 Vaccinium macrocarpon
VMungo0720G2126 Vigna mungo
VMungo0720G2412 Vigna mungo
Zm00001eb204030 Zea mays
Zm00001eb238080 Zea mays

User provided reference genes

Program Settings