Gene: vmacro07110

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro07110
  • Transcript Identifier vmacro07110-RA
  • Gene Type Coding gene
  • Location chr2_Vaccinium_macrocarpon_Stevens_v1 : 19752485-19756126 : positive

Gene Family Information

  • ID HOM05D003093
  • #Genes/#Species 222/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro07110_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to RDM16: Protein RDM16 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0044030
ISO
PLAZA Integrative Orthologyregulation of DNA methylation AT1G28060
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G28060
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT1G28060

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046540
IEA
InterProU4/U6 x U5 tri-snRNP complex
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT1G28060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027104 U4/U6 small nuclear ribonucleoprotein Prp3
IPR013881 Pre-mRNA-splicing factor 3
Mapman id Description
35.1 not assigned.annotated