Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p17860 Brassica napus
A09p01460 Brassica napus
A09p68600 Brassica napus
A10p01310 Brassica napus
Aa31LG1G9940 Aethionema arabicum
Aa31LG5G1650 Aethionema arabicum
Aa31LG5G1660 Aethionema arabicum
Aa31LG5G1670 Aethionema arabicum
Aa31LG7G13590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.351 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2385 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2405 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2412 Anthoceros agrestis
Actinidia09404 Actinidia chinensis
Actinidia12038 Actinidia chinensis
Actinidia15076 Actinidia chinensis
Actinidia21398 Actinidia chinensis
Actinidia36477 Actinidia chinensis
Actinidia36479 Actinidia chinensis
Actinidia36480 Actinidia chinensis
Ah.12g055310 Amaranthus hybridus
AL1G14210 Arabidopsis lyrata
AL4G13290 Arabidopsis lyrata
AL6G51230 Arabidopsis lyrata
Aqoxy2G02756 Aquilegia oxysepala
Aqoxy6G01263 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.46RN8V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4E9YQ9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A2AIVT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B4Q1Z0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K909MU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W9B7XJ Arachis hypogaea
AT1G02580 Arabidopsis thaliana
AT2G23380 Arabidopsis thaliana
AT4G02020 Arabidopsis thaliana
ATR0762G033 Amborella trichopoda
ATR0796G019 Amborella trichopoda
ATR0796G202 Amborella trichopoda
Atru.chr3.285 Acer truncatum
Atru.chr3.297 Acer truncatum
Atru.chr3.298 Acer truncatum
Atru.chr5.989 Acer truncatum
AUR62007328 Chenopodium quinoa
AUR62011797 Chenopodium quinoa
AUR62018672 Chenopodium quinoa
AUR62024644 Chenopodium quinoa
BcaB01g02089 Brassica carinata
BcaB03g15769 Brassica carinata
BcaC04g24025 Brassica carinata
BcaC07g42309 Brassica carinata
BcaC07g42399 Brassica carinata
BolC4t26841H Brassica oleracea
BolC5t28913H Brassica oleracea
BolC8t52836H Brassica oleracea
BolC9t53091H Brassica oleracea
BraA04t17406Z Brassica rapa
BraA09t35808Z Brassica rapa
BraA09t42203Z Brassica rapa
BraA10t42409Z Brassica rapa
C04p52760 Brassica napus
C05p01310 Brassica napus
C08p53210 Brassica napus
C09p01580 Brassica napus
CAN.G2059.1 Capsicum annuum
CAN.G26.42 Capsicum annuum
CAN.G26.43 Capsicum annuum
CAN.G300.8 Capsicum annuum
CAN.G370.38 Capsicum annuum
CAN.G777.15 Capsicum annuum
CAN.G82.27 Capsicum annuum
CANSAT25G2675 Cannabis sativa
CANSAT56G3592 Cannabis sativa
CARHR001890 Cardamine hirsuta
CARHR249660 Cardamine hirsuta
CARHR254420 Cardamine hirsuta
CARHR293010 Cardamine hirsuta
Carub.0001s0164 Capsella rubella
Carub.0004s0258 Capsella rubella
Carub.0006s3521 Capsella rubella
Ca_03468_v3 Cicer arietinum L.
Ca_09214_v3 Cicer arietinum L.
Ca_10280_v3 Cicer arietinum L.
Ca_24754_v3 Cicer arietinum L.
CBR_g8474 Chara braunii
Cc01_g21480 Coffea canephora
Cc07_g06160 Coffea canephora
CDE05G1048 Ceratophyllum demersum
CDE05G1598 Ceratophyllum demersum
CDE11G0387 Ceratophyllum demersum
Cfa004038 Carpinus fangiana
Cfa005790 Carpinus fangiana
Cfa027176 Carpinus fangiana
Ciclev10018849m.g Citrus clementina
Ciclev10024826m.g Citrus clementina
CiPaw.01G016000 Carya illinoinensis
CiPaw.07G117900 Carya illinoinensis
CiPaw.08G089400 Carya illinoinensis
ClCG02G012290 Citrullus lanatus
ClCG10G011440 Citrullus lanatus
COL.COLO4_23226 Corchorus olitorius
COL.COLO4_23227 Corchorus olitorius
Cpa.g.sc18.51 Carica papaya
Cpa.g.sc18.52 Carica papaya
Cpa.g.sc55.123 Carica papaya
Cre17.g746247 Chlamydomonas reinhardtii
CsaV3_2G016440 Cucumis sativus L.
CsaV3_4G001250 Cucumis sativus L.
CSS0008472 Camellia sinensis var. sinensis
CSS0037750 Camellia sinensis var. sinensis
DCAR_002893 Daucus carota
DCAR_010878 Daucus carota
DCAR_025745 Daucus carota
Dinv10104 Davidia involucrata
Dinv26841 Davidia involucrata
Duzib133G0697 Durio zibethinus
Duzib138G0223 Durio zibethinus
Duzib138G0981 Durio zibethinus
Duzib147G0380 Durio zibethinus
Duzib211G0304 Durio zibethinus
Duzib264G0310 Durio zibethinus
ECA232G4092 Erigeron canadensis
ECA236G1295 Erigeron canadensis
ECA238G2209 Erigeron canadensis
EL10Ac5g12042 Beta vulgaris
EL10As5g23539 Beta vulgaris
Eucgr.H01011 Eucalyptus grandis
Eucgr.H01689 Eucalyptus grandis
Eucgr.H01730 Eucalyptus grandis
FAN04G0280 Fragaria x ananassa
FAN08G1061 Fragaria x ananassa
FAN13G3223 Fragaria x ananassa
FAN18G0688 Fragaria x ananassa
FAN18G1687 Fragaria x ananassa
FAN18G3477 Fragaria x ananassa
FAN19G2367 Fragaria x ananassa
FAN23G1340 Fragaria x ananassa
FAN26G1733 Fragaria x ananassa
FAN28G1453 Fragaria x ananassa
FvH4_1g16260 Fragaria vesca
FvH4_5g39110 Fragaria vesca
Glyma.01G188000 Glycine max
Glyma.02G012100 Glycine max
Glyma.03G219800 Glycine max
Glyma.03G224300 Glycine max
Glyma.10G012600 Glycine max
Glyma.11G054100 Glycine max
Glyma.11G067000 Glycine max
Glyma.19G216601 Glycine max
Gohir.A10G091400 Gossypium hirsutum
Gohir.A11G194300 Gossypium hirsutum
Gohir.A12G124400 Gossypium hirsutum
Gohir.D10G096800 Gossypium hirsutum
Gohir.D11G200800 Gossypium hirsutum
Gohir.D12G128300 Gossypium hirsutum
Gorai.007G215200 Gossypium raimondii
Gorai.008G139100 Gossypium raimondii
Gorai.011G106100 Gossypium raimondii
GSVIVG01022097001 Vitis vinifera
GSVIVG01028124001 Vitis vinifera
GSVIVG01028125001 Vitis vinifera
HanXRQChr04g0106141 Helianthus annuus
HanXRQChr09g0263611 Helianthus annuus
HanXRQChr10g0285251 Helianthus annuus
HanXRQChr10g0285261 Helianthus annuus
HanXRQChr10g0285271 Helianthus annuus
HanXRQChr14g0448991 Helianthus annuus
HanXRQChr14g0449011 Helianthus annuus
Haze_05051 Corylus avellana
Haze_15376 Corylus avellana
Hma1.2p1_0017F.1_g011520 Hydrangea macrophylla
Hma1.2p1_0065F.1_g035530 Hydrangea macrophylla
Hma1.2p1_0212F.1_g089900 Hydrangea macrophylla
Hma1.2p1_0486F.1_g163320 Hydrangea macrophylla
Hma1.2p1_0642F.1_g194290 Hydrangea macrophylla
HPP92_010366 Vanilla planifolia
HPP92_013523 Vanilla planifolia
Hund09635 Selenicereus undatus
Hund14356 Selenicereus undatus
Lalb_Chr05g0213331 Lupinus albus
Lalb_Chr05g0226461 Lupinus albus
Lalb_Chr06g0166891 Lupinus albus
Lalb_Chr09g0333811 Lupinus albus
Lalb_Chr09g0333821 Lupinus albus
Lalb_Chr16g0378621 Lupinus albus
Lj1C16G9 Lonicera japonica
Lj1g0020618 Lotus japonicus
Lj2g0004210 Lotus japonicus
Lj2g0017750 Lotus japonicus
Lj4C152G4 Lonicera japonica
Lj5g0020955 Lotus japonicus
Lj7A72T11 Lonicera japonica
Lsat_1_v5_gn_2_85201 Lactuca sativa
Lsat_1_v5_gn_4_165081 Lactuca sativa
Lsat_1_v5_gn_8_166720 Lactuca sativa
Lsat_1_v5_gn_9_2740 Lactuca sativa
Lsat_1_v5_gn_9_2760 Lactuca sativa
Manes.01G228300 Manihot esculenta
Manes.05G004000 Manihot esculenta
Manes.13G122500 Manihot esculenta
Mapoly0010s0166 Marchantia polymorpha
Mapoly0084s0024 Marchantia polymorpha
Mapoly0084s0051 Marchantia polymorpha
MBI19_g07234_MAGBIO Magnolia biondii
MCO12G075 Micromonas commoda
MD00G1179500 Malus domestica
MD02G1174900 Malus domestica
MD02G1175000 Malus domestica
MD03G1294100 Malus domestica
MD15G1285900 Malus domestica
Medtr1g086980 Medicago truncatula
Medtr5g016870 Medicago truncatula
Medtr7g055660 Medicago truncatula
Medtr7g109560 Medicago truncatula
Medtr8g064240 Medicago truncatula
Medtr8g064250 Medicago truncatula
Medtr8g064310 Medicago truncatula
Medtr8g064320 Medicago truncatula
MELO3C017913.2 Cucumis melo
MELO3C020854.2 Cucumis melo
Migut.D00079 Erythranthe guttata
Migut.H00416 Erythranthe guttata
MSTRG.23736 Avicennia marina
Nitab4.5_0000333g0090 Nicotiana tabacum
Nitab4.5_0001169g0040 Nicotiana tabacum
Nitab4.5_0002694g0060 Nicotiana tabacum
Nitab4.5_0002765g0040 Nicotiana tabacum
Nitab4.5_0003540g0140 Nicotiana tabacum
Nitab4.5_0005458g0030 Nicotiana tabacum
Nn1g04788 Nelumbo nucifera
Nn3g21702 Nelumbo nucifera
Nn5g30354 Nelumbo nucifera
Oeu009821.1 Olea europaea
Oeu014941.1 Olea europaea
Oeu024297.1 Olea europaea
Oeu047397.1 Olea europaea
Os03g0307800 Oryza sativa ssp. japonica
Os06g0275500 Oryza sativa ssp. japonica
Peaxi162Scf00549g00018 Petunia axillaris
Peaxi162Scf00668g00448 Petunia axillaris
Peaxi162Scf00685g00124 Petunia axillaris
Peaxi162Scf00691g00061 Petunia axillaris
Peaxi162Scf00691g00318 Petunia axillaris
Peaxi162Scf00691g00630 Petunia axillaris
PGR083G2868 Punica granatum
PGR102G0980 Punica granatum
PGSC0003DMG400004008 Solanum tuberosum
PGSC0003DMG400009044 Solanum tuberosum
PGSC0003DMG400034096 Solanum tuberosum
Phvul.001G213300 Phaseolus vulgaris
Phvul.002G017200 Phaseolus vulgaris
Phvul.002G029000 Phaseolus vulgaris
Phvul.007G213900 Phaseolus vulgaris
Potri.002G195700 Populus trichocarpa
Potri.005G140200 Populus trichocarpa
Potri.007G045800 Populus trichocarpa
Potri.014G120100 Populus trichocarpa
Pp3c22_22940 Physcomitrium patens
PRCOL_00002866 Prasinoderma coloniale
Prupe.7G130900 Prunus persica
Prupe.8G266200 Prunus persica
Psat2g167760 Pisum sativum
Psat3g019880 Pisum sativum
Psat3g149600 Pisum sativum
Psat6g161440 Pisum sativum
PSO210G4231 Papaver somniferum
PSO541G3977 Papaver somniferum
PSO541G5211 Papaver somniferum
PSO675G1539 Papaver somniferum
PSO675G2001 Papaver somniferum
PSO761G0227 Papaver somniferum
QL06p040854 Quercus lobata
QL12p019781 Quercus lobata
RcHm_v2.0_Chr2g0105971 Rosa chinensis
RcHm_v2.0_Chr7g0241101 Rosa chinensis
Rhsim13G0004900 Rhododendron simsii
Sabra02G0161300 Salix brachista
Sabra05G0110800 Salix brachista
Sabra07G0040800 Salix brachista
Sabra14G0089000 Salix brachista
SalBow3G4274 Salvia bowleyana
Sc03g0001710 Simmondsia chinensis
Sc05g0000380 Simmondsia chinensis
Sed0010509 Sechium edule
Sed0027071 Sechium edule
SEGI_02295 Sequoiadendron giganteum
SEGI_15160 Sequoiadendron giganteum
SEGI_23592 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07331 Striga asiatica
SGA_v2.0_scaffold334G49069 Striga asiatica
SGA_v2.0_scaffold376G50287 Striga asiatica
SHI34099 Sapria himalayana
SHI34100 Sapria himalayana
SMO200G0157 Selaginella moellendorffii
SMO338G0016 Selaginella moellendorffii
Solyc01g079390.4 Solanum lycopersicum
Solyc02g093190.3 Solanum lycopersicum
Solyc03g044380.3 Solanum lycopersicum
Sopen01g031180 Solanum pennellii
Sopen02g037780 Solanum pennellii
Sopen03g008460 Solanum pennellii
Sp1g01600 Schrenkiella parvula
Sp4g02390 Schrenkiella parvula
Sp6g01900 Schrenkiella parvula
TAR362G0138 Trochodendron aralioides
TAR376G0213 Trochodendron aralioides
THA.LOC104807590 Tarenaya hassleriana
THA.LOC104825939 Tarenaya hassleriana
Thecc.01G059400 Theobroma cacao
Thecc.01G314100 Theobroma cacao
Thhalv10000037m.g Eutrema salsugineum
Thhalv10009931m.g Eutrema salsugineum
Thhalv10028423m.g Eutrema salsugineum
TPR.G22604 Trifolium pratense
TPR.G26894 Trifolium pratense
TPR.G38101 Trifolium pratense
TPR.G38612 Trifolium pratense
TPR.G4117 Trifolium pratense
TPR.G6471 Trifolium pratense
TWI09G0496 Tripterygium wilfordii
TWI18G0805 Tripterygium wilfordii
TWI36G1529 Tripterygium wilfordii
unitig_60.g25653 Utricularia gibba
unitig_899.g14950 Utricularia gibba
vmacro02403 Vaccinium macrocarpon
vmacro17960 Vaccinium macrocarpon
VMungo0720G1771 Vigna mungo
VMungo1215G1746 Vigna mungo
VMungo1383G2407 Vigna mungo
Zm00001eb014730 Zea mays
Zm00001eb271490 Zea mays
Zm00001eb396070 Zea mays

User provided reference genes

Program Settings