Gene: Nitab4.5_0003540g0140

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0003540g0140
  • Transcript Identifier Nitab4.5_0003540g0140.1
  • Gene Type Coding gene
  • Location Nitab4.5_0003540 : 99799-112385 : negative

Gene Family Information

  • ID HOM05D001902
  • #Genes/#Species 346/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0003540g0140.1
  • SR1-identifier Nta02g10880.1

Descriptions

  • Description SET domain, Histone-lysine N-methyltransferase, EZ
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990110
ISO
PLAZA Integrative Orthologycallus formation AT4G02020
GO:0070734
ISO
PLAZA Integrative Orthologyhistone H3-K27 methylation Os03g0307800
GO:2000014
ISO
PLAZA Integrative Orthologyregulation of endosperm development AT1G02580
GO:0048587
ISO
PLAZA Integrative Orthologyregulation of short-day photoperiodism, flowering Os03g0307800
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G02580
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G02020
GO:0006349
ISO
PLAZA Integrative Orthologyregulation of gene expression by genetic imprinting AT1G02580
GO:0009646
ISO
PLAZA Integrative Orthologyresponse to absence of light AT1G02580
GO:0006342
ISO
PLAZA Integrative Orthologychromatin silencing Os03g0307800
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT4G02020
GO:0048317
ISO
PLAZA Integrative Orthologyseed morphogenesis AT1G02580
GO:1900055
ISO
PLAZA Integrative Orthologyregulation of leaf senescence AT4G02020

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT4G02020
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G02580
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G02020
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G02580
GO:0031519
IEA
InterProPcG protein complex
GO:0005677
ISO
PLAZA Integrative Orthologychromatin silencing complex AT4G02020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025778 Histone-lysine N-methyltransferase
IPR001214 SET domain
Mapman id Description
12.3.3.2.1.1.4 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.catalytic component CLF/SWN/MEA