Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p00370 Brassica napus
A08p09650 Brassica napus
A09p54870 Brassica napus
Aa31LG10G16850 Aethionema arabicum
Aa31LG1G29460 Aethionema arabicum
Aa31LG9G5220 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3680 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1079 Anthoceros agrestis
Actinidia00721 Actinidia chinensis
Actinidia02483 Actinidia chinensis
Actinidia13370 Actinidia chinensis
Actinidia31883 Actinidia chinensis
Actinidia38521 Actinidia chinensis
Ah.04g163070 Amaranthus hybridus
Ah.08g212860 Amaranthus hybridus
Ah.11g044270 Amaranthus hybridus
AL3G53970 Arabidopsis lyrata
AL4G47640 Arabidopsis lyrata
AL5G45820 Arabidopsis lyrata
AL7G30840 Arabidopsis lyrata
AL7G44140 Arabidopsis lyrata
AL7G44150 Arabidopsis lyrata
Aqoxy211s007 Aquilegia oxysepala
Aqoxy2G03185 Aquilegia oxysepala
Aqoxy5G00566 Aquilegia oxysepala
Aqoxy7G02693 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N90ILP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QSQE7C Arachis hypogaea
AT3G63030 Arabidopsis thaliana
AT4G00416 Arabidopsis thaliana
AT4G22745 Arabidopsis thaliana
AT5G35330 Arabidopsis thaliana
AT5G35338 Arabidopsis thaliana
ATR0626G029 Amborella trichopoda
ATR0626G302 Amborella trichopoda
Atru.chr5.1327 Acer truncatum
Atru.chr7.974 Acer truncatum
AUR62004809 Chenopodium quinoa
AUR62020710 Chenopodium quinoa
AUR62028014 Chenopodium quinoa
AUR62033687 Chenopodium quinoa
AUR62036027 Chenopodium quinoa
AUR62036028 Chenopodium quinoa
AUR62036774 Chenopodium quinoa
BcaB02g08079 Brassica carinata
BcaB04g18054 Brassica carinata
BcaC02g10336 Brassica carinata
BcaC07g37670 Brassica carinata
BcaC07g40786 Brassica carinata
BcaC07g42713 Brassica carinata
BcaC07g42716 Brassica carinata
BolC4t24551H Brassica oleracea
BolC8t48040H Brassica oleracea
BraA04t15755Z Brassica rapa
BraA08t32962Z Brassica rapa
BraA09t40897Z Brassica rapa
C02p01260 Brassica napus
C04p30190 Brassica napus
C08p37770 Brassica napus
CAN.G106.15 Capsicum annuum
CAN.G1581.4 Capsicum annuum
CAN.G1682.10 Capsicum annuum
CAN.G1682.15 Capsicum annuum
CAN.G1682.9 Capsicum annuum
CANSAT25G0213 Cannabis sativa
CANSAT80G0007 Cannabis sativa
CARHR111510 Cardamine hirsuta
CARHR143430 Cardamine hirsuta
CARHR173320 Cardamine hirsuta
CARHR217370 Cardamine hirsuta
Carub.0003s3543 Capsella rubella
Carub.0005s2967 Capsella rubella
Carub.0007s1818 Capsella rubella
Carub.0007s1856 Capsella rubella
Carub.0007s3115 Capsella rubella
Carub.0007s3159 Capsella rubella
Carub.0007s3165 Capsella rubella
Ca_10394_v3 Cicer arietinum L.
Ca_10395_v3 Cicer arietinum L.
Ca_25603_v3 Cicer arietinum L.
Ca_25630_v3 Cicer arietinum L.
Ca_25632_v3 Cicer arietinum L.
CBR_g37407 Chara braunii
Cc00_g00460 Coffea canephora
Cc00_g20200 Coffea canephora
CDE01G0196 Ceratophyllum demersum
CDE04G2318 Ceratophyllum demersum
CDE12G0897 Ceratophyllum demersum
Cfa006076 Carpinus fangiana
Cfa020736 Carpinus fangiana
Ciclev10008843m.g Citrus clementina
Ciclev10022348m.g Citrus clementina
CiPaw.07G096300 Carya illinoinensis
CiPaw.15G155200 Carya illinoinensis
CiPaw.16G103200 Carya illinoinensis
ClCG09G006740 Citrullus lanatus
ClCG11G011500 Citrullus lanatus
COL.COLO4_33454 Corchorus olitorius
Cpa.g.sc115.32 Carica papaya
Cpa.g.sc9.132 Carica papaya
CsaV3_2G009010 Cucumis sativus L.
CsaV3_7G028470 Cucumis sativus L.
CSS0006410 Camellia sinensis var. sinensis
CSS0007735 Camellia sinensis var. sinensis
CSS0027028 Camellia sinensis var. sinensis
CSS0027698 Camellia sinensis var. sinensis
DCAR_002762 Daucus carota
DCAR_023752 Daucus carota
DCAR_027418 Daucus carota
DCAR_032348 Daucus carota
Dinv12597 Davidia involucrata
Dinv26467 Davidia involucrata
Dinv32971 Davidia involucrata
Duzib150G1194 Durio zibethinus
Duzib168G1817 Durio zibethinus
ECA234G3906 Erigeron canadensis
ECA236G3662 Erigeron canadensis
ECA240G0360 Erigeron canadensis
ECA247G3568 Erigeron canadensis
EL10Ac1g02087 Beta vulgaris
EL10Ac2g03640 Beta vulgaris
EL10Ac4g08969 Beta vulgaris
EL10Ac7g17190 Beta vulgaris
Eucgr.C00067 Eucalyptus grandis
Eucgr.H01546 Eucalyptus grandis
FAN07G0851 Fragaria x ananassa
FAN12G2880 Fragaria x ananassa
FAN15G3065 Fragaria x ananassa
FAN17G1350 Fragaria x ananassa
FAN20G1579 Fragaria x ananassa
FAN22G1406 Fragaria x ananassa
FAN24G0411 Fragaria x ananassa
FAN27G1113 Fragaria x ananassa
FvH4_2g24220 Fragaria vesca
FvH4_4g06240 Fragaria vesca
Glyma.01G002200 Glycine max
Glyma.02G150300 Glycine max
Glyma.07G130300 Glycine max
Glyma.10G023600 Glycine max
Gohir.A05G001300 Gossypium hirsutum
Gohir.D05G001600 Gossypium hirsutum
Gorai.009G001500 Gossypium raimondii
GSVIVG01011058001 Vitis vinifera
GSVIVG01032322001 Vitis vinifera
HanXRQChr03g0067341 Helianthus annuus
HanXRQChr04g0117971 Helianthus annuus
HanXRQChr06g0164021 Helianthus annuus
HanXRQChr09g0245901 Helianthus annuus
HanXRQChr12g0359211 Helianthus annuus
HanXRQChr15g0466561 Helianthus annuus
Haze_04773 Corylus avellana
Haze_19051 Corylus avellana
Hma1.2p1_0284F.1_g113830 Hydrangea macrophylla
Hma1.2p1_0314F.1_g121970 Hydrangea macrophylla
Hma1.2p1_2318F.1_g319790 Hydrangea macrophylla
HPP92_010798 Vanilla planifolia
HPP92_015811 Vanilla planifolia
HPP92_017094 Vanilla planifolia
HPP92_017104 Vanilla planifolia
HPP92_025232 Vanilla planifolia
HPP92_028346 Vanilla planifolia
Hund05361 Selenicereus undatus
Hund19364 Selenicereus undatus
Lalb_Chr14g0361701 Lupinus albus
Lalb_Chr21g0306631 Lupinus albus
Lalb_Chr24g0401801 Lupinus albus
Lj1A43G54 Lonicera japonica
Lj2g0010885 Lotus japonicus
Lj5A743T19 Lonicera japonica
Lj5g0018222 Lotus japonicus
Lsat_1_v5_gn_5_82421 Lactuca sativa
Lsat_1_v5_gn_7_57621 Lactuca sativa
Lsat_1_v5_gn_8_55481 Lactuca sativa
Manes.05G071600 Manihot esculenta
Manes.15G099400 Manihot esculenta
Mapoly0013s0155 Marchantia polymorpha
Mapoly0059s0065 Marchantia polymorpha
Mapoly0079s0044 Marchantia polymorpha
MBI13_g31568_MAGBIO Magnolia biondii
MBI13_g34294_MAGBIO Magnolia biondii
MBI19_g46384_MAGBIO Magnolia biondii
MD03G1271900 Malus domestica
MD11G1292500 Malus domestica
MD13G1234700 Malus domestica
MD16G1239500 Malus domestica
Medtr0019s0270 Medicago truncatula
Medtr0019s0310 Medicago truncatula
Medtr0019s0330 Medicago truncatula
Medtr1g089750 Medicago truncatula
Medtr3g037400 Medicago truncatula
Medtr3g037440 Medicago truncatula
Medtr3g040660 Medicago truncatula
Medtr3g435450 Medicago truncatula
Medtr3g435470 Medicago truncatula
Medtr6g027240 Medicago truncatula
Medtr6g027250 Medicago truncatula
Medtr6g055750 Medicago truncatula
Medtr6g055760 Medicago truncatula
Medtr6g093020 Medicago truncatula
Medtr7g013320 Medicago truncatula
MELO3C003942.2 Cucumis melo
MELO3C015875.2 Cucumis melo
Migut.B00848 Erythranthe guttata
Migut.J00831 Erythranthe guttata
Migut.J00832 Erythranthe guttata
Migut.K00353 Erythranthe guttata
Migut.K00354 Erythranthe guttata
Migut.K01233 Erythranthe guttata
Migut.K01234 Erythranthe guttata
Migut.N02136 Erythranthe guttata
Migut.N02137 Erythranthe guttata
Migut.O00741 Erythranthe guttata
MSTRG.10463 Avicennia marina
MSTRG.12580 Avicennia marina
MSTRG.26521 Avicennia marina
Nitab4.5_0000413g0060 Nicotiana tabacum
Nitab4.5_0001205g0020 Nicotiana tabacum
Nitab4.5_0002093g0080 Nicotiana tabacum
Nitab4.5_0004188g0070 Nicotiana tabacum
Nitab4.5_0005411g0070 Nicotiana tabacum
Nitab4.5_0010603g0010 Nicotiana tabacum
Nn2g12782 Nelumbo nucifera
Nn3g21180 Nelumbo nucifera
Nn8g41094 Nelumbo nucifera
Oeu000375.3 Olea europaea
Oeu015364.1 Olea europaea
Oeu015727.1 Olea europaea
Oeu021032.1 Olea europaea
Oeu028810.1 Olea europaea
Oeu036947.1 Olea europaea
Oeu047481.1 Olea europaea
Oeu047486.1 Olea europaea
Oeu047903.1 Olea europaea
Oeu052293.1 Olea europaea
Oeu057450.1 Olea europaea
Oeu057461.1 Olea europaea
Os05g0404600 Oryza sativa ssp. japonica
Os05g0404700 Oryza sativa ssp. japonica
Os06g0702100 Oryza sativa ssp. japonica
Os09g0494300 Oryza sativa ssp. japonica
Peaxi162Scf00320g00413 Petunia axillaris
Peaxi162Scf00954g00319 Petunia axillaris
Peaxi162Scf01039g00228 Petunia axillaris
PGR119G2076 Punica granatum
PGR142G2549 Punica granatum
PGSC0003DMG400006274 Solanum tuberosum
PGSC0003DMG400006275 Solanum tuberosum
PGSC0003DMG400013699 Solanum tuberosum
PGSC0003DMG402020117 Solanum tuberosum
Phvul.004G177500 Phaseolus vulgaris
Phvul.007G168400 Phaseolus vulgaris
Potri.002G212600 Populus trichocarpa
Potri.006G077600 Populus trichocarpa
Potri.014G137100 Populus trichocarpa
Potri.018G145500 Populus trichocarpa
Potri.018G146700 Populus trichocarpa
Pp3c4_4120 Physcomitrium patens
Prupe.1G065600 Prunus persica
Prupe.8G248100 Prunus persica
Psat1g051160 Pisum sativum
Psat6g169800 Pisum sativum
PSO017G4274 Papaver somniferum
PSO063G5421 Papaver somniferum
PSO170G3539 Papaver somniferum
PSO210G1548 Papaver somniferum
PSO210G7598 Papaver somniferum
PSO302G0098 Papaver somniferum
PSO302G0182 Papaver somniferum
PSO478G1737 Papaver somniferum
QL11p009249 Quercus lobata
QL11p011525 Quercus lobata
QL12p022986 Quercus lobata
RcHm_v2.0_Chr4g0397961 Rosa chinensis
RcHm_v2.0_Chr6g0292001 Rosa chinensis
Rhsim03G0268500 Rhododendron simsii
Rhsim13G0021000 Rhododendron simsii
Sabra06G0058700 Salix brachista
Sabra08G0000300 Salix brachista
Sabra08G0000400 Salix brachista
Sabra08G0014200 Salix brachista
Sabra14G0103500 Salix brachista
Sabra16G0113900 Salix brachista
Sabra19G0059200 Salix brachista
SalBow3G0250 Salvia bowleyana
SalBow6G0354 Salvia bowleyana
Sc22g0002290 Simmondsia chinensis
Sc23g0004330 Simmondsia chinensis
Sc23g0004940 Simmondsia chinensis
Sed0009365 Sechium edule
Sed0013888 Sechium edule
Sed0027537 Sechium edule
SEGI_01377 Sequoiadendron giganteum
SEGI_11634 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09625 Striga asiatica
SGA_v2.0_scaffold229G43362 Striga asiatica
SGA_v2.0_scaffold31G12721 Striga asiatica
SGA_v2.0_scaffold36G14375 Striga asiatica
SGA_v2.0_scaffold45G17055 Striga asiatica
SGA_v2.0_scaffold693G53460 Striga asiatica
SHI15283 Sapria himalayana
SMO111G0066 Selaginella moellendorffii
Solyc01g067965.1 Solanum lycopersicum
Solyc05g041150.1 Solanum lycopersicum
Solyc05g041160.3 Solanum lycopersicum
Solyc05g047450.3 Solanum lycopersicum
Solyc06g084400.3 Solanum lycopersicum
Solyc07g015930.3 Solanum lycopersicum
Solyc10g018450.1 Solanum lycopersicum
Solyc10g018460.1 Solanum lycopersicum
Solyc10g018470.1 Solanum lycopersicum
Solyc10g018490.1 Solanum lycopersicum
Sopen04g008850 Solanum pennellii
Sopen06g035790 Solanum pennellii
Sp4g29940 Schrenkiella parvula
Sp5g00490 Schrenkiella parvula
Sp7g07070 Schrenkiella parvula
SpUn0005_0170 Schrenkiella parvula
SpUn0417_0010 Schrenkiella parvula
TAR345G0001 Trochodendron aralioides
TAR365G0632 Trochodendron aralioides
TAR383G0816 Trochodendron aralioides
TAR626G1512 Trochodendron aralioides
THA.LOC104808910 Tarenaya hassleriana
THA.LOC104815317 Tarenaya hassleriana
THA.LOC104817541 Tarenaya hassleriana
THA.LOC104823060 Tarenaya hassleriana
Thecc.09G194000 Theobroma cacao
Thhalv10001805m.g Eutrema salsugineum
Thhalv10003457m.g Eutrema salsugineum
Thhalv10003468m.g Eutrema salsugineum
Thhalv10006277m.g Eutrema salsugineum
Thhalv10023035m.g Eutrema salsugineum
Thhalv10023039m.g Eutrema salsugineum
Thhalv10023065m.g Eutrema salsugineum
Thhalv10028037m.g Eutrema salsugineum
TPR.G13311 Trifolium pratense
TPR.G21354 Trifolium pratense
TPR.G21362 Trifolium pratense
TPR.G28348 Trifolium pratense
TPR.G35387 Trifolium pratense
TWI15G0757 Tripterygium wilfordii
TWI23G1124 Tripterygium wilfordii
TWI32G0050 Tripterygium wilfordii
TWI34G1874 Tripterygium wilfordii
TWI59G0702 Tripterygium wilfordii
unitig_0.g1194 Utricularia gibba
unitig_8.g4679 Utricularia gibba
vmacro02536 Vaccinium macrocarpon
vmacro20780 Vaccinium macrocarpon
vmacro20782 Vaccinium macrocarpon
vmacro22291 Vaccinium macrocarpon
VMungo0464G1505 Vigna mungo
VMungo0720G2330 Vigna mungo
Zm00001eb102090 Zea mays
Zm00001eb120500 Zea mays
Zm00001eb287780 Zea mays
Zm00001eb317100 Zea mays
Zm00001eb349820 Zea mays

User provided reference genes

Program Settings