Gene: AT5G35338

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G35338
  • Transcript Identifier AT5G35338.2
  • Gene Type Coding gene
  • Location Chr5 : 13549343-13550124 : negative

Gene Family Information

  • ID HOM05D001776
  • #Genes/#Species 367/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G35338.2
  • symbol MBD12
  • uniprot Q9FZP6

Descriptions

  • Description methyl-CPG-binding domain 12
  • Computational description methyl-CPG-binding domain 12 (MBD12); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain protein 02 (TAIR:AT5G35330.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0008327
ISS
Gene Ontologymethyl-CpG binding1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISS, ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001739 Methyl-CpG DNA binding
IPR016177 DNA-binding domain superfamily
IPR011124 Zinc finger, CW-type
Mapman id Description
12.5.4.1 Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD1-4/12)