Gene: Sp5g00490
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp5g00490
- Transcript Identifier Sp5g00490.1
- Gene Type Coding gene
- Location ch5-1 : 166317-167470 : negative
Gene Family Information
- ID HOM05D001776
- #Genes/#Species 367/98
- Phylogenetic origin
- ID ORTHO05D001771
- #Genes/#Species 358/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Sp5g00490.v2.2
- pacid 45076037
Descriptions
- Description PF01429//PF07496 - Methyl-CpG binding domain (MBD) // CW-type Zinc Finger (zf-CW)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G63030 |
| GO:0051747 | ISO | PLAZA Integrative Orthology | cytosine C-5 DNA demethylase activity | AT3G63030 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G63030 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.5.4.1 | Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD1-4/12) |