Gene: vmacro20780
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro20780
- Transcript Identifier vmacro20780-RA
- Gene Type Coding gene
- Location scaffold00274_Vaccinium_macrocarpon_Stevens_v1 : 225063-230999 : positive
Gene Family Information
- ID HOM05D001776
- #Genes/#Species 367/98
- Phylogenetic origin
- ID ORTHO05D001771
- #Genes/#Species 358/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id vmacro20780_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to MBD2: Methyl-CpG-binding domain-containing protein 2 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0008270 | ISO | PLAZA Homology (enrichment) | zinc ion binding | HOM05D001776 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G35330 |
| GO:0051747 | ISO | PLAZA Integrative Orthology | cytosine C-5 DNA demethylase activity | AT5G35330 |
| GO:0019899 | ISO | PLAZA Integrative Orthology | enzyme binding | AT5G35330 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G35330 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.5.4.1 | Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD1-4/12) |