Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Ah.10g027180 Amaranthus hybridus
Ah.10g027370 Amaranthus hybridus
Ah.10g027490 Amaranthus hybridus
Ah.10g028950 Amaranthus hybridus
AL2G20620 Arabidopsis lyrata
AL2G21650 Arabidopsis lyrata
AL3G43780 Arabidopsis lyrata
Aqoxy12s028 Aquilegia oxysepala
Aqoxy23s001 Aquilegia oxysepala
Aqoxy7G02251 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0W708Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.18X8Z9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.55BQ3X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CA7A2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EIB34T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FT2N09 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GL8TWV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.II40LE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IZN0CS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JG4FEH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JT01TE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LR0RIW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P04IPH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SFFG2P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TN657V Arachis hypogaea
ATCG00680 Arabidopsis thaliana
ATR0306G004 Amborella trichopoda
Atru.chr10.2092 Acer truncatum
AUR62002775 Chenopodium quinoa
AUR62006475 Chenopodium quinoa
AUR62033613 Chenopodium quinoa
BcaB03g16405 Brassica carinata
BcaC02g09455 Brassica carinata
BcaC03g15272 Brassica carinata
BcaC03g16544 Brassica carinata
BcaC07g42434 Brassica carinata
BcaC08g44749 Brassica carinata
BcaC08g44750 Brassica carinata
BNapus_Darmor_BZH_scaffold_253p00270 Brassica napus
BNapus_Darmor_BZH_scaffold_253p00280 Brassica napus
BNapus_Darmor_BZH_scaffold_287p00240 Brassica napus
BNapus_Darmor_BZH_scaffold_57p00010 Brassica napus
BolC2t08918H Brassica oleracea
BolC4t25864H Brassica oleracea
BolC6t36202H Brassica oleracea
BolC7t41716H Brassica oleracea
BolC7t41717H Brassica oleracea
BolSC29t60481H Brassica oleracea
BolSC29t60602H Brassica oleracea
BolSC35t60661H Brassica oleracea
BolSC35t60738H Brassica oleracea
BolSC46t61012H Brassica oleracea
BolSC46t61025H Brassica oleracea
BolSC47t61083H Brassica oleracea
BolSC49t61170H Brassica oleracea
BraA06t25376Z Brassica rapa
BraA06t25377Z Brassica rapa
BraA09t39430Z Brassica rapa
BraSC103t45451Z Brassica rapa
BraSC103t45478Z Brassica rapa
BraSC138t45561Z Brassica rapa
BraSC58t46435Z Brassica rapa
BraSC58t46497Z Brassica rapa
BraSC59t46579Z Brassica rapa
C02p28680 Brassica napus
C02p43620 Brassica napus
C04p42930 Brassica napus
C04p42940 Brassica napus
C06p22920 Brassica napus
C06p23080 Brassica napus
CAN.G1185.2 Capsicum annuum
CAN.G129.13 Capsicum annuum
CAN.G1478.4 Capsicum annuum
CAN.G1478.8 Capsicum annuum
CAN.G1595.7 Capsicum annuum
CAN.G1739.6 Capsicum annuum
CAN.G2018.11 Capsicum annuum
CAN.G204.3 Capsicum annuum
CAN.G219.31 Capsicum annuum
CAN.G233.9 Capsicum annuum
CAN.G34.6 Capsicum annuum
CAN.G648.3 Capsicum annuum
CAN.G8.21 Capsicum annuum
CAN.G904.4 Capsicum annuum
CARHR282190 Cardamine hirsuta
Carub.0001s3366 Capsella rubella
Ca_27401_v3 Cicer arietinum L.
Ca_27402_v3 Cicer arietinum L.
CBR_g74630 Chara braunii
CDE02G3652 Ceratophyllum demersum
Cfa021573 Carpinus fangiana
Ciclev10003146m.g Citrus clementina
COL.COLO4_00402 Corchorus olitorius
COL.COLO4_00598 Corchorus olitorius
COL.COLO4_01313 Corchorus olitorius
COL.COLO4_01862 Corchorus olitorius
COL.COLO4_03062 Corchorus olitorius
COL.COLO4_03161 Corchorus olitorius
COL.COLO4_03185 Corchorus olitorius
COL.COLO4_04469 Corchorus olitorius
COL.COLO4_31381 Corchorus olitorius
COL.COLO4_37397 Corchorus olitorius
Cpa.g.c31780 Carica papaya
Cpa.g.sc185.13 Carica papaya
Cpa.g.sc66.109 Carica papaya
CsaV3_UNG207970 Cucumis sativus L.
DCAR_023434 Daucus carota
DCAR_032511 Daucus carota
Dinv01983 Davidia involucrata
Dinv23964 Davidia involucrata
Dinv33425 Davidia involucrata
Duzib026G0003 Durio zibethinus
Duzib124G0006 Durio zibethinus
Duzib237G0002 Durio zibethinus
Duzib252G0006 Durio zibethinus
Duzib256G0004 Durio zibethinus
ECA074G0003 Erigeron canadensis
EL10Ac1g00387 Beta vulgaris
EL10Ac1g01194 Beta vulgaris
EL10Ac1g01195 Beta vulgaris
EL10Ac2g03320 Beta vulgaris
EL10Ac5g13041 Beta vulgaris
EL10Ac9g20700 Beta vulgaris
EL10Ac9g21114 Beta vulgaris
EL10Ac9g21118 Beta vulgaris
EL10Ac9g21119 Beta vulgaris
EL10As12g24031 Beta vulgaris
EL10As15g24123 Beta vulgaris
EL10As15g24125 Beta vulgaris
EL10As15g24126 Beta vulgaris
Eucgr.A00264 Eucalyptus grandis
Eucgr.F01309 Eucalyptus grandis
Gohir.1Z049666 Gossypium hirsutum
Gohir.1Z078801 Gossypium hirsutum
Gohir.A09G004950 Gossypium hirsutum
Gohir.A09G044450 Gossypium hirsutum
Gohir.A12G124750 Gossypium hirsutum
Gohir.A12G229100 Gossypium hirsutum
Gohir.D01G102034 Gossypium hirsutum
Gohir.D01G209050 Gossypium hirsutum
Gohir.D02G096900 Gossypium hirsutum
Gohir.D05G244650 Gossypium hirsutum
Gohir.D06G113901 Gossypium hirsutum
Gohir.D06G145266 Gossypium hirsutum
Gohir.D08G029650 Gossypium hirsutum
Gohir.D09G012501 Gossypium hirsutum
Gohir.D11G263033 Gossypium hirsutum
Gohir.D12G088201 Gossypium hirsutum
Gohir.D13G099025 Gossypium hirsutum
Gorai.001G099800 Gossypium raimondii
Gorai.001G201300 Gossypium raimondii
Gorai.001G244900 Gossypium raimondii
Gorai.002G148800 Gossypium raimondii
Gorai.002G254300 Gossypium raimondii
Gorai.003G087600 Gossypium raimondii
Gorai.004G027100 Gossypium raimondii
Gorai.005G110500 Gossypium raimondii
Gorai.006G014600 Gossypium raimondii
Gorai.007G251900 Gossypium raimondii
Gorai.007G282700 Gossypium raimondii
Gorai.007G283100 Gossypium raimondii
Gorai.009G253800 Gossypium raimondii
Gorai.010G129900 Gossypium raimondii
Gorai.010G169000 Gossypium raimondii
Gorai.012G044000 Gossypium raimondii
Gorai.N012700 Gossypium raimondii
GSVIVG01006503001 Vitis vinifera
GSVIVG01028641001 Vitis vinifera
HanXRQChr00c0314g0573511 Helianthus annuus
HanXRQChr00c0392g0574501 Helianthus annuus
HanXRQChr00c0557g0575771 Helianthus annuus
HanXRQChr01g0020271 Helianthus annuus
HanXRQChr02g0052551 Helianthus annuus
HanXRQChr02g0053221 Helianthus annuus
HanXRQChr04g0094311 Helianthus annuus
HanXRQChr04g0127531 Helianthus annuus
HanXRQChr07g0197341 Helianthus annuus
HanXRQChr08g0230251 Helianthus annuus
HanXRQChr09g0242581 Helianthus annuus
HanXRQChr10g0283631 Helianthus annuus
HanXRQChr10g0284321 Helianthus annuus
HanXRQChr10g0289331 Helianthus annuus
HanXRQChr10g0299311 Helianthus annuus
HanXRQChr10g0318121 Helianthus annuus
HanXRQChr11g0326911 Helianthus annuus
HanXRQChr11g0345221 Helianthus annuus
HanXRQChr16g0506211 Helianthus annuus
HanXRQCPg0580121 Helianthus annuus
Hma1.2p1_0084F.1_g043800 Hydrangea macrophylla
Hma1.2p1_0815F.1_g222690 Hydrangea macrophylla
HPP92_022277 Vanilla planifolia
HPP92_028401 Vanilla planifolia
Hund04055 Selenicereus undatus
Hund08571 Selenicereus undatus
Hund08805 Selenicereus undatus
Hund10594 Selenicereus undatus
Hund10713 Selenicereus undatus
Hund12525 Selenicereus undatus
Hund15207 Selenicereus undatus
Hund19318 Selenicereus undatus
Hund22693 Selenicereus undatus
Hund25909 Selenicereus undatus
Hund27465 Selenicereus undatus
Hund27480 Selenicereus undatus
Hund27575 Selenicereus undatus
Hund27595 Selenicereus undatus
Hund27894 Selenicereus undatus
Hund27959 Selenicereus undatus
Hund27982 Selenicereus undatus
Hund28048 Selenicereus undatus
Hund28106 Selenicereus undatus
Hund28265 Selenicereus undatus
Hund28325 Selenicereus undatus
Hund28456 Selenicereus undatus
Hund28468 Selenicereus undatus
Hund28487 Selenicereus undatus
Hund28516 Selenicereus undatus
Hund28526 Selenicereus undatus
Hund28629 Selenicereus undatus
Hund28675 Selenicereus undatus
Hund28743 Selenicereus undatus
Hund28755 Selenicereus undatus
Hund28756 Selenicereus undatus
Hund28843 Selenicereus undatus
Hund28889 Selenicereus undatus
Hund29019 Selenicereus undatus
Hund29033 Selenicereus undatus
Hund29160 Selenicereus undatus
Hund29161 Selenicereus undatus
Hund29214 Selenicereus undatus
Hund29227 Selenicereus undatus
Hund29233 Selenicereus undatus
Hund29509 Selenicereus undatus
Hund29522 Selenicereus undatus
Hund29533 Selenicereus undatus
Hund29534 Selenicereus undatus
Hund29544 Selenicereus undatus
Hund29549 Selenicereus undatus
Hund29552 Selenicereus undatus
Hund29562 Selenicereus undatus
Hund29566 Selenicereus undatus
Hund29573 Selenicereus undatus
Hund29584 Selenicereus undatus
Hund29590 Selenicereus undatus
Hund29601 Selenicereus undatus
Hund29602 Selenicereus undatus
Hund29609 Selenicereus undatus
Hund29666 Selenicereus undatus
Hund29678 Selenicereus undatus
Hund29717 Selenicereus undatus
Hund30034 Selenicereus undatus
Hund30066 Selenicereus undatus
Hund30083 Selenicereus undatus
Hund30095 Selenicereus undatus
Hund30303 Selenicereus undatus
Hund30444 Selenicereus undatus
Hund30484 Selenicereus undatus
Hund30586 Selenicereus undatus
Hund30619 Selenicereus undatus
Hund30701 Selenicereus undatus
Hund30740 Selenicereus undatus
Hund30755 Selenicereus undatus
Hund30756 Selenicereus undatus
Hund30997 Selenicereus undatus
Hund31073 Selenicereus undatus
Lalb_Chr07g0192031 Lupinus albus
Lalb_Chr08g0236171 Lupinus albus
Lalb_Chr15g0080801 Lupinus albus
Lalb_Chr18g0049361 Lupinus albus
Lalb_Chr18g0049371 Lupinus albus
Lalb_Chr18g0049711 Lupinus albus
Lalb_Chr23g0274181 Lupinus albus
Lalb_Chr25g0280661 Lupinus albus
Lalb_Chr25g0283331 Lupinus albus
Lj2A1237G133 Lonicera japonica
Lj2P1234T92 Lonicera japonica
Lj2P1235T101 Lonicera japonica
Lj2P1239T127 Lonicera japonica
Lj6P382T15 Lonicera japonica
LjContig00318g0016009 Lotus japonicus
LjContig00319g0023151 Lotus japonicus
Lju50C25G5 Lonicera japonica
Lju50C25G6 Lonicera japonica
Lsat_1_v5_gn_1_75781 Lactuca sativa
Lsat_1_v5_gn_2_51020 Lactuca sativa
Lsat_1_v5_gn_3_45960 Lactuca sativa
Lsat_1_v5_gn_5_50320 Lactuca sativa
Lsat_1_v5_gn_5_861 Lactuca sativa
Lsat_1_v5_gn_5_881 Lactuca sativa
Lsat_1_v5_gn_6_19721 Lactuca sativa
Lsat_1_v5_gn_8_11001 Lactuca sativa
Lsat_1_v5_gn_8_77880 Lactuca sativa
Lsat_1_v5_gn_9_51000 Lactuca sativa
MD00G1121600 Malus domestica
Medtr0002s0740 Medicago truncatula
Medtr4g051370 Medicago truncatula
Medtr4g083450 Medicago truncatula
Medtr5g041300 Medicago truncatula
Medtr5g041320 Medicago truncatula
Medtr5g092940 Medicago truncatula
Medtr8g039420 Medicago truncatula
MELO3C000500.2 Cucumis melo
MELO3C002898.2 Cucumis melo
MELO3C027459.2 Cucumis melo
Migut.D01364 Erythranthe guttata
Migut.D01947 Erythranthe guttata
Migut.K01174 Erythranthe guttata
Migut.N02087 Erythranthe guttata
Nitab4.5_0001105g0130 Nicotiana tabacum
Nitab4.5_0001660g0040 Nicotiana tabacum
Nitab4.5_0002282g0130 Nicotiana tabacum
Nitab4.5_0002596g0120 Nicotiana tabacum
Nitab4.5_0002739g0090 Nicotiana tabacum
Nitab4.5_0004376g0150 Nicotiana tabacum
Nitab4.5_0008074g0020 Nicotiana tabacum
Nitab4.5_0010531g0040 Nicotiana tabacum
Nitab4.5_0010922g0030 Nicotiana tabacum
Nitab4.5_0018523g0020 Nicotiana tabacum
Nn1g07994 Nelumbo nucifera
Nn1g09714 Nelumbo nucifera
Nn2g14821 Nelumbo nucifera
Nn314s46301 Nelumbo nucifera
Nn3g18041 Nelumbo nucifera
Oeu004678.1 Olea europaea
Oeu008581.1 Olea europaea
Oeu028771.1 Olea europaea
Oeu053042.1 Olea europaea
Oeu058364.1 Olea europaea
Oeu058365.1 Olea europaea
Peaxi162Scf00121g00178 Petunia axillaris
Peaxi162Scf00299g00112 Petunia axillaris
Peaxi162Scf00527g00036 Petunia axillaris
Peaxi162Scf00987g00022 Petunia axillaris
PGR111G0071 Punica granatum
PGSC0003DMG400004326 Solanum tuberosum
PGSC0003DMG400006472 Solanum tuberosum
PGSC0003DMG400046303 Solanum tuberosum
Phvul.001G066100 Phaseolus vulgaris
Phvul.008G162200 Phaseolus vulgaris
Phvul.008G292600 Phaseolus vulgaris
Potri.011G074868 Populus trichocarpa
Potri.011G113575 Populus trichocarpa
Potri.017G140700 Populus trichocarpa
Pp3c21_5650 Physcomitrium patens
Prupe.7G029800 Prunus persica
PSO548G0100 Papaver somniferum
QL93p0311_0003 Quercus lobata
QL93p1043_0014 Quercus lobata
RcHm_v2.0_Chr6g0260461 Rosa chinensis
RcHm_v2.0_Chr6g0260471 Rosa chinensis
RcHm_v2.0_CPg0501971 Rosa chinensis
RhsimPtG0002000 Rhododendron simsii
SabraPtG0004000 Salix brachista
SalBow1G0046 Salvia bowleyana
SalBow1G7132 Salvia bowleyana
Sc03g0005680 Simmondsia chinensis
Sc24g0000870 Simmondsia chinensis
Sed0007408 Sechium edule
Sed0011733 Sechium edule
Sed0012510 Sechium edule
Sed0016821 Sechium edule
Sed0019665 Sechium edule
SEGI_00107 Sequoiadendron giganteum
SEGI_01832 Sequoiadendron giganteum
SEGI_05365 Sequoiadendron giganteum
SEGI_05523 Sequoiadendron giganteum
SEGI_07565 Sequoiadendron giganteum
SEGI_09858 Sequoiadendron giganteum
SEGI_10357 Sequoiadendron giganteum
SEGI_10521 Sequoiadendron giganteum
SEGI_10580 Sequoiadendron giganteum
SEGI_12077 Sequoiadendron giganteum
SEGI_12115 Sequoiadendron giganteum
SEGI_12382 Sequoiadendron giganteum
SEGI_13281 Sequoiadendron giganteum
SEGI_14518 Sequoiadendron giganteum
SEGI_14555 Sequoiadendron giganteum
SEGI_16433 Sequoiadendron giganteum
SEGI_16649 Sequoiadendron giganteum
SEGI_16997 Sequoiadendron giganteum
SEGI_17520 Sequoiadendron giganteum
SEGI_19633 Sequoiadendron giganteum
SEGI_21706 Sequoiadendron giganteum
SEGI_22708 Sequoiadendron giganteum
SEGI_22946 Sequoiadendron giganteum
SEGI_23649 Sequoiadendron giganteum
SEGI_23726 Sequoiadendron giganteum
SEGI_25005 Sequoiadendron giganteum
SEGI_25414 Sequoiadendron giganteum
SEGI_26965 Sequoiadendron giganteum
SEGI_27179 Sequoiadendron giganteum
SEGI_28389 Sequoiadendron giganteum
SEGI_28704 Sequoiadendron giganteum
SEGI_29085 Sequoiadendron giganteum
SEGI_31552 Sequoiadendron giganteum
SEGI_39675 Sequoiadendron giganteum
SEGI_40065 Sequoiadendron giganteum
SEGI_40987 Sequoiadendron giganteum
SEGI_41253 Sequoiadendron giganteum
SGA_v2.0_scaffold334G49035 Striga asiatica
SGA_v2.0_scaffold479G52253 Striga asiatica
SGA_v2.0_scaffold58G20386 Striga asiatica
SMO086G0001 Selaginella moellendorffii
Solyc00g118680.2 Solanum lycopersicum
Solyc00g500024.1 Solanum lycopersicum
Solyc00g500071.1 Solanum lycopersicum
Solyc01g011417.1 Solanum lycopersicum
Sopen01g008000 Solanum pennellii
Sopen01g027130 Solanum pennellii
Sopen01g027200 Solanum pennellii
Sopen02g004650 Solanum pennellii
Sopen05g017070 Solanum pennellii
Sopen07g005320 Solanum pennellii
Sopen08g010240 Solanum pennellii
Sopen10g010300 Solanum pennellii
TAR369G1069 Trochodendron aralioides
TAR381G0241 Trochodendron aralioides
TPR.G22043 Trifolium pratense
TWI09G1156 Tripterygium wilfordii
unitig_91.g26510 Utricularia gibba
vmacro11633 Vaccinium macrocarpon
vmacro22410 Vaccinium macrocarpon
VMungo0354G0003 Vigna mungo

User provided reference genes

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