Gene: Lj2A1237G133
General Information
Structural Information
- Species Lonicera japonica
- Gene Identifier Lj2A1237G133
- Transcript Identifier Lj2A1237G133.1
- Gene Type Coding gene
- Location GWHAAZE00000002 : 123748288-123752183 : positive
Gene Family Information
- ID HOM05D000580
- #Genes/#Species 959/83
- Phylogenetic origin
- ID ORTHO05D001362
- #Genes/#Species 423/73
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Lj2A1237G133.1
- Accession GWHGAAZE010133
- Accession GWHTAAZE010145
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0022904 | IEA | InterPro | respiratory electron transport chain | |
| GO:0010207 | ISO | PLAZA Integrative Orthology | photosystem II assembly | ATCG00680 |
| GO:0015979 | IEA | InterPro | photosynthesis | |
| GO:0009772 | IEA | InterPro | photosynthetic electron transport in photosystem II | |
| GO:0019684 | IEA | InterPro | photosynthesis, light reaction | |
| GO:0009767 | IEA | InterPro | photosynthetic electron transport chain |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0020037 | ISO | PLAZA Integrative Orthology | heme binding | ATCG00720 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00720 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | ATCG00680 |
| GO:0009055 | IEA | InterPro | electron transfer activity | |
| GO:0045156 | IEA | InterPro | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | |
| GO:0016168 | IEA | InterPro | chlorophyll binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | ATCG00720 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | ATCG00720 |
| GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | ATCG00680 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | ATCG00720 |
| GO:0009512 | ISO | PLAZA Integrative Orthology | cytochrome b6f complex | ATCG00720 |
| GO:0009539 | ISO | PLAZA Integrative Orthology | photosystem II reaction center | ATCG00680 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00720 |
| GO:0009523 | IEA | InterPro | photosystem II | |
| GO:0009521 | IEA | InterPro | photosystem | |
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005797 | Cytochrome b/b6, N-terminal |
| IPR000932 | Photosystem antenna protein-like |
| IPR027387 | Cytochrome b/b6-like domain superfamily |
| IPR017486 | Photosystem II CP47 reaction centre protein |
| IPR016174 | Di-haem cytochrome, transmembrane |
| IPR036001 | Photosystem antenna protein-like superfamily |
| Mapman id | Description |
|---|---|
| 1.1.2.2 | Photosynthesis.photophosphorylation.cytochrome b6/f complex.apocytochrome b component PetB |