Gene: RcHm_v2.0_Chr6g0260461

General Information

Structural Information

Species Rosa chinensis
Gene Identifier RcHm_v2.0_Chr6g0260461
Transcript Identifier RcHm_v2.0_Chr6g0260461
Gene Type Coding gene
Location RcHm_v2.0_Chr6 : 15433655-15434501 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000580
#Genes/#Species 959/83
Phylogenetic origin

ID ORTHO05D001362
#Genes/#Species 423/73
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009767	IEA	InterPro	photosynthetic electron transport chain
GO:0019684	IEA	InterPro	photosynthesis, light reaction
GO:0010207	ISO	PLAZA Integrative Orthology	photosystem II assembly	ATCG00680

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016168	IEA	InterPro	chlorophyll binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	ATCG00680
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	ATCG00680

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009521	IEA	InterPro	photosystem
GO:0016020	IEA	InterPro	membrane
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	ATCG00680
GO:0009539	ISO	PLAZA Integrative Orthology	photosystem II reaction center	ATCG00680
GO:0009534	ISO	PLAZA Integrative Orthology	chloroplast thylakoid	ATCG00680
GO:0010287	ISO	PLAZA Integrative Orthology	plastoglobule	ATCG00680
GO:0009535	ISO	PLAZA Integrative Orthology	chloroplast thylakoid membrane	ATCG00680
GO:0009579	ISO	PLAZA Integrative Orthology	thylakoid	ATCG00680

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000932	Photosystem antenna protein-like
IPR036001	Photosystem antenna protein-like superfamily

Mapman id	Description
35.1	not assigned.annotated