Gene: SEGI_10580

General Information

Structural Information

  • Species Sequoiadendron giganteum
  • Gene Identifier SEGI_10580
  • Transcript Identifier SEGI_10580.1
  • Gene Type Coding gene
  • Location chr6 : 87082883-87088351 : negative

Gene Family Information

  • ID HOM05D000580
  • #Genes/#Species 959/83
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SEGI_10580.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly ATCG00680
GO:0015979
IEA
InterProphotosynthesis
GO:0019684
IEA
InterProphotosynthesis, light reaction
GO:0009767
IEA
InterProphotosynthetic electron transport chain

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00680
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00680
GO:0016168
IEA
InterProchlorophyll binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane ATCG00680
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule ATCG00680
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid ATCG00680
GO:0009539
ISO
PLAZA Integrative Orthologyphotosystem II reaction center ATCG00680
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00680
GO:0009521
IEA
InterProphotosystem
GO:0009579
IEA
InterProthylakoid
GO:0009522
IEA
InterProphotosystem I
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000932 Photosystem antenna protein-like
IPR003359 Photosystem I Ycf4, assembly
IPR036001 Photosystem antenna protein-like superfamily
Mapman id Description
1.1.4.3.4 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (YCF4)