Gene: Lsat_1_v5_gn_6_19721

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_6_19721
  • Transcript Identifier Lsat_1_v5_gn_6_19721.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_6 : 25169989-25171513 : positive

Gene Family Information

  • ID HOM05D000580
  • #Genes/#Species 959/83
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_6_19721.v5
  • pacid 38939144

Descriptions

  • Description PF00421 - Photosystem II protein (PSII)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009767
IEA
InterProphotosynthetic electron transport chain
GO:0019684
IEA
InterProphotosynthesis, light reaction
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly ATCG00680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016168
IEA
InterProchlorophyll binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00680
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00680

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009521
IEA
InterProphotosystem
GO:0016020
IEA
InterPromembrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00680
GO:0009539
ISO
PLAZA Integrative Orthologyphotosystem II reaction center ATCG00680
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid ATCG00680
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule ATCG00680
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane ATCG00680
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid ATCG00680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000932 Photosystem antenna protein-like
IPR036001 Photosystem antenna protein-like superfamily
Mapman id Description
35.1 not assigned.annotated