Gene: RcHm_v2.0_CPg0501971
General Information
Structural Information
- Species Rosa chinensis
- Gene Identifier RcHm_v2.0_CPg0501971
- Transcript Identifier RcHm_v2.0_CPg0501971
- Gene Type Coding gene
- Location RcHm_v2.0_CP : 37594-39195 : negative
Gene Family Information
- ID HOM05D000580
- #Genes/#Species 959/83
- Phylogenetic origin
- ID ORTHO05D001362
- #Genes/#Species 423/73
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010207 | ISO | PLAZA Integrative Orthology | photosystem II assembly | ATCG00680 |
| GO:0015979 | IEA | InterPro | photosynthesis | |
| GO:0009772 | IEA | InterPro | photosynthetic electron transport in photosystem II | |
| GO:0019684 | IEA | InterPro | photosynthesis, light reaction | |
| GO:0009767 | IEA | InterPro | photosynthetic electron transport chain |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00680 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | ATCG00680 |
| GO:0045156 | IEA | InterPro | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | |
| GO:0016168 | IEA | InterPro | chlorophyll binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00680 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | ATCG00680 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | ATCG00680 |
| GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | ATCG00680 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | ATCG00680 |
| GO:0009539 | ISO | PLAZA Integrative Orthology | photosystem II reaction center | ATCG00680 |
| GO:0009521 | IEA | InterPro | photosystem | |
| GO:0009523 | IEA | InterPro | photosystem II | |
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 1.1.1.2.1.3 | Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.component CP47/PsbB |