Gene: COL.COLO4_03062

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_03062
  • Transcript Identifier COL.rna1999
  • Gene Type Coding gene
  • Location AWUE01009027.1 : 16-1107 : negative

Gene Family Information

  • ID HOM05D000580
  • #Genes/#Species 959/83
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna1999
  • GenBank OMP12534.1
  • id gene3037
  • gene_name COLO4_03062
  • uniprot A0A1R3KZK4

Descriptions

  • Description Photosystem antenna protein-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly ATCG00680
GO:0015979
IEA
GOA Databasephotosynthesis
GO:0015979
IEA
InterProphotosynthesis
GO:0009772
IEA
GOA Databasephotosynthetic electron transport in photosystem II
GO:0009772
IEA
InterProphotosynthetic electron transport in photosystem II
GO:0019684
IEA
GOA Databasephotosynthesis, light reaction
GO:0019684
IEA
InterProphotosynthesis, light reaction
GO:0009767
IEA
GOA Databasephotosynthetic electron transport chain
GO:0009767
IEA
InterProphotosynthetic electron transport chain
GO:0018298
IEA
GOA Databaseprotein-chromophore linkage

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016168
IEA
GOA Databasechlorophyll binding
GO:0016168
IEA
InterProchlorophyll binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00680
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00680
GO:0045156
IEA
GOA Databaseelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0045156
IEA
InterProelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid ATCG00680
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane ATCG00680
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule ATCG00680
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid ATCG00680
GO:0009539
ISO
PLAZA Integrative Orthologyphotosystem II reaction center ATCG00680
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00680
GO:0009523
IEA
GOA Databasephotosystem II
GO:0009523
IEA
InterProphotosystem II
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0009521
IEA
GOA Databasephotosystem
GO:0009521
IEA
InterProphotosystem
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000932 Photosystem antenna protein-like
IPR036001 Photosystem antenna protein-like superfamily
IPR017486 Photosystem II CP47 reaction centre protein
Mapman id Description
35.1 not assigned.annotated