Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12870 Brassica napus
Aa31LG7G1410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis
Ah.03g143010 Amaranthus hybridus
Ah.03g143030 Amaranthus hybridus
Aqoxy2G03950 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea
AT1G16970 Arabidopsis thaliana
ATR0609G005 Amborella trichopoda
Atru.chr2.2052 Acer truncatum
Atru.chr2.2053 Acer truncatum
AUR62003718 Chenopodium quinoa
AUR62018029 Chenopodium quinoa
AUR62043732 Chenopodium quinoa
BcaB02g06659 Brassica carinata
BcaC05g25552 Brassica carinata
BolC4t22161H Brassica oleracea
BolC5t30234H Brassica oleracea
BraA06t24447Z Brassica rapa
C05p15280 Brassica napus
CAN.G710.40 Capsicum annuum
CANSAT11G1108 Cannabis sativa
CANSAT78G0600 Cannabis sativa
CARHR017480 Cardamine hirsuta
CARHR154100 Cardamine hirsuta
Carub.0001s1670 Capsella rubella
Ca_11423_v3 Cicer arietinum L.
Ca_11424_v3 Cicer arietinum L.
Ca_11425_v3 Cicer arietinum L.
CBR_g19434 Chara braunii
Cc03_g10570 Coffea canephora
CDE02G2779 Ceratophyllum demersum
Cfa021664 Carpinus fangiana
Ciclev10019318m.g Citrus clementina
CiPaw.01G108300 Carya illinoinensis
ClCG07G016640 Citrullus lanatus
COL.COLO4_17513 Corchorus olitorius
Cpa.g.sc77.50 Carica papaya
Cre13.g607500 Chlamydomonas reinhardtii
CsaV3_4G003770 Cucumis sativus L.
CSS0045945 Camellia sinensis var. sinensis
DCAR_005495 Daucus carota
DCAR_005496 Daucus carota
Dinv44237 Davidia involucrata
Duzib213G0841 Durio zibethinus
ECA246G3778 Erigeron canadensis
Eucgr.F03241 Eucalyptus grandis
Eucgr.L02132 Eucalyptus grandis
FAN07G2792 Fragaria x ananassa
FAN12G0395 Fragaria x ananassa
FAN12G2778 Fragaria x ananassa
FAN17G0552 Fragaria x ananassa
FAN22G0061 Fragaria x ananassa
FvH4_4g12150 Fragaria vesca
Glyma.20G248800 Glycine max
Gohir.A01G052100 Gossypium hirsutum
Gohir.D01G041500 Gossypium hirsutum
Gorai.002G052100 Gossypium raimondii
GSVIVG01031668001 Vitis vinifera
HanXRQChr13g0406711 Helianthus annuus
Haze_11079 Corylus avellana
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla
HPP92_015929 Vanilla planifolia
HPP92_015930 Vanilla planifolia
Hund19684 Selenicereus undatus
Hund20183 Selenicereus undatus
Lalb_Chr06g0164661 Lupinus albus
Lj4A728T41 Lonicera japonica
Lj5g0023092 Lotus japonicus
Lsat_1_v5_gn_3_24941 Lactuca sativa
Manes.03G099000 Manihot esculenta
Mapoly0113s0020 Marchantia polymorpha
MBI07_g00628_MAGBIO Magnolia biondii
MCO14G338 Micromonas commoda
MD13G1278700 Malus domestica
Medtr1g116980 Medicago truncatula
MELO3C017678.2 Cucumis melo
Migut.N00440 Erythranthe guttata
MSTRG.17865 Avicennia marina
Nitab4.5_0001526g0130 Nicotiana tabacum
Nitab4.5_0001687g0050 Nicotiana tabacum
Nn3g20967 Nelumbo nucifera
Oeu013397.2 Olea europaea
Os07g0184900 Oryza sativa ssp. japonica
Peaxi162Scf00286g00443 Petunia axillaris
PGR031G2404 Punica granatum
PGSC0003DMG400014069 Solanum tuberosum
Phvul.007G001600 Phaseolus vulgaris
Potri.004G093250 Populus trichocarpa
Potri.006G132501 Populus trichocarpa
Potri.011G107400 Populus trichocarpa
Pp3c18_7140 Physcomitrium patens
Prupe.1G178000 Prunus persica
Psat6g243280 Pisum sativum
PSO017G2886 Papaver somniferum
PSO675G6876 Papaver somniferum
QL10p044141 Quercus lobata
RcHm_v2.0_Chr4g0409801 Rosa chinensis
Rhsim07G0086500 Rhododendron simsii
Sabra11G0095200 Salix brachista
Sc22g0003230 Simmondsia chinensis
Sed0017452 Sechium edule
SEGI_11325 Sequoiadendron giganteum
SEGI_31905 Sequoiadendron giganteum
SEGI_35314 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31142 Striga asiatica
SHI27652 Sapria himalayana
SMO361G0513 Selaginella moellendorffii
SMO361G0769 Selaginella moellendorffii
Solyc09g098230.3 Solanum lycopersicum
Sopen09g036170 Solanum pennellii
Sp1g15110 Schrenkiella parvula
TAR365G1167 Trochodendron aralioides
THA.LOC104812308 Tarenaya hassleriana
Thecc.07G123700 Theobroma cacao
Thhalv10007085m.g Eutrema salsugineum
TPR.G8868 Trifolium pratense
TPR.G8879 Trifolium pratense
TPR.G8907 Trifolium pratense
TWI38G2388 Tripterygium wilfordii
unitig_578.g15953 Utricularia gibba
unitig_578.g15954 Utricularia gibba
vmacro12608 Vaccinium macrocarpon
vmacro13984 Vaccinium macrocarpon
VMungo0720G1636 Vigna mungo
Zm00001eb114470 Zea mays
Zm00001eb116810 Zea mays

User provided reference genes

Program Settings