Gene: TPR.G8907

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G8907
  • Transcript Identifier TPR.T9209
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG1 : 11501255-11503880 : negative

Gene Family Information

  • ID HOM05D006139
  • #Genes/#Species 129/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA9209.v2
  • id Tp57577_TGAC_v2_gene8907.v2
  • pacid 35979887
  • uniprot A0A2K3MSE4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000723
IEA
GOA Databasetelomere maintenance
GO:0000723
IEA
InterProtelomere maintenance
GO:0006303
IEA
GOA Databasedouble-strand break repair via nonhomologous end joining
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
GOA Databasehelicase activity
GO:0042162
IEA
GOA Databasetelomeric DNA binding
GO:0042162
IEA
InterProtelomeric DNA binding
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0003678
IEA
InterProDNA helicase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003684
IEA
GOA Databasedamaged DNA binding
GO:0003684
IEA
InterProdamaged DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0043564
IEA
GOA DatabaseKu70:Ku80 complex
GO:0043564
IEA
InterProKu70:Ku80 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003034 SAP domain
IPR016194 SPOC-like, C-terminal domain superfamily
IPR005160 Ku70/Ku80 C-terminal arm
IPR006165 Ku70
IPR006164 Ku70/Ku80 beta-barrel domain
IPR036361 SAP domain superfamily
Mapman id Description
14.4.1.1 DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU70