Gene: ATR0609G005

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0609G005
  • Transcript Identifier ATR0609G005.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00020 : 750860-800758 : positive

Gene Family Information

  • ID HOM05D006139
  • #Genes/#Species 129/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00020.28.v1.0
  • pacid 31554665

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:0000723
IEA
InterProtelomere maintenance
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G16970
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G16970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0042162
IEA
InterProtelomeric DNA binding
GO:0003678
IEA
InterProDNA helicase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G16970
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT1G16970

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0043564
IEA
InterProKu70:Ku80 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036465 von Willebrand factor A-like domain superfamily
IPR016194 SPOC-like, C-terminal domain superfamily
IPR006164 Ku70/Ku80 beta-barrel domain
IPR027388 Ku70, bridge and pillars domain superfamily
IPR003034 SAP domain
IPR006165 Ku70
IPR005161 Ku70/Ku80, N-terminal alpha/beta
IPR036361 SAP domain superfamily
IPR005160 Ku70/Ku80 C-terminal arm
Mapman id Description
14.4.1.1 DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU70