Gene: Zm00001eb116810

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb116810
  • Transcript Identifier Zm00001eb116810_T001
  • Gene Type Coding gene
  • Location 2 : 239339616-239350107 : negative

Gene Family Information

  • ID HOM05D006139
  • #Genes/#Species 129/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb116810_T001
  • pid Zm00001eb116810_P001
  • uniprot A0A1D6F8Z2
  • uniprot A0A1D6F8Z5
  • uniprot A0A1D6F8Z4
  • uniprot A0A1D6F8Z3
  • uniprot C0HGH3
  • uniprot A0A1D6F906
  • uniprot A0A1D6F904
  • uniprot A0A3L6FTT5
  • uniprot A0A1D6F908
  • uniprot A0A1D6F8Z9
  • uniprot A0A1D6F8Z8
  • uniprot A0A1D6F8Z7
  • uniprot A0A1D6F903
  • uniprot A0A1D6F914
  • uniprot A0A1D6F902
  • uniprot A0A1D6F901
  • uniprot A0A1D6F912
  • uniprot A0A1D6F911
  • entrez 100381505
  • refseq NM_001320881.1
  • refseq NP_001307810.1
  • V4_identifier Zm00001d007807

Descriptions

  • Description Zm00001e011447
  • Description ATP-dependent DNA helicase 2 subunit KU70
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071480
IBA
GOA Databasecellular response to gamma radiation
GO:0071481
IBA
GOA Databasecellular response to X-ray
GO:0006303
IBA
IEA
GOA Databasedouble-strand break repair via nonhomologous end joining
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:0000723
IBA
IEA
GOA Databasetelomere maintenance
GO:0000723
IEA
InterProtelomere maintenance
GO:0009408
IEA
GOA Databaseresponse to heat
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0003678
IEA
InterProDNA helicase activity
GO:0003690
IBA
IEA
GOA Databasedouble-stranded DNA binding
GO:0042162
IBA
IEA
GOA Databasetelomeric DNA binding
GO:0042162
IEA
InterProtelomeric DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003684
IEA
GOA Databasedamaged DNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G16970
GO:0004386
IEA
GOA Databasehelicase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043564
IBA
IEA
GOA DatabaseKu70:Ku80 complex
GO:0043564
IEA
InterProKu70:Ku80 complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003034 SAP domain
IPR005160 Ku70/Ku80 C-terminal arm
IPR006164 Ku70/Ku80 beta-barrel domain
IPR006165 Ku70
IPR016194 SPOC-like, C-terminal domain superfamily
IPR036465 von Willebrand factor A-like domain superfamily
IPR036361 SAP domain superfamily
IPR005161 Ku70/Ku80, N-terminal alpha/beta
IPR027388 Ku70, bridge and pillars domain superfamily
Mapman id Description
14.4.1.1 DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU70