Gene: CSS0045945
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0045945
- Transcript Identifier CSS0045945.1
- Gene Type Coding gene
- Location Chr9 : 42973331-42998786 : negative
Gene Family Information
- ID HOM05D006139
- #Genes/#Species 129/95
- Phylogenetic origin
- ID ORTHO05D007681
- #Genes/#Species 128/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0045945.1
Descriptions
- Description Ku70 homolog [Populus nigra]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006303 | IEA | InterPro | double-strand break repair via nonhomologous end joining | |
GO:0000723 | IEA | InterPro | telomere maintenance | |
GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT1G16970 |
GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT1G16970 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0003684 | IEA | InterPro | damaged DNA binding | |
GO:0042162 | IEA | InterPro | telomeric DNA binding | |
GO:0003678 | IEA | InterPro | DNA helicase activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G16970 |
GO:0003690 | ISO | PLAZA Integrative Orthology | double-stranded DNA binding | AT1G16970 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | InterPro | nucleus | |
GO:0043564 | IEA | InterPro | Ku70:Ku80 complex |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR003034 | SAP domain |
IPR036361 | SAP domain superfamily |
IPR005161 | Ku70/Ku80, N-terminal alpha/beta |
IPR006164 | Ku70/Ku80 beta-barrel domain |
IPR036465 | von Willebrand factor A-like domain superfamily |
IPR016194 | SPOC-like, C-terminal domain superfamily |
IPR027388 | Ku70, bridge and pillars domain superfamily |
IPR006165 | Ku70 |
IPR005160 | Ku70/Ku80 C-terminal arm |
Mapman id | Description |
---|---|
14.4.1.1 | DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU70 |