Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p05430 Brassica napus
A10p25610 Brassica napus
Aa31LG3G15040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1592 Anthoceros agrestis
Ah.05g173120 Amaranthus hybridus
AL3G46680 Arabidopsis lyrata
AL6G22970 Arabidopsis lyrata
Aqoxy2G00401 Aquilegia oxysepala
Aqoxy2G00402 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6RB8S0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L4QR06 Arachis hypogaea
AT2G14870 Arabidopsis thaliana
AT5G12190 Arabidopsis thaliana
ATR0763G184 Amborella trichopoda
Atru.chr3.2998 Acer truncatum
AUR62013740 Chenopodium quinoa
AUR62023411 Chenopodium quinoa
BcaB01g05427 Brassica carinata
BcaNung07015 Brassica carinata
BolC3t13140H Brassica oleracea
BraA03t09881Z Brassica rapa
BraA10t44628Z Brassica rapa
C03p06320 Brassica napus
CANSAT11G0073 Cannabis sativa
CARHR200930 Cardamine hirsuta
Carub.0006s1069 Capsella rubella
Ca_06201_v3 Cicer arietinum L.
Ca_07394_v3 Cicer arietinum L.
Ca_11896_v3 Cicer arietinum L.
CBR_g501 Chara braunii
Cc03_g11600 Coffea canephora
CDE08G0916 Ceratophyllum demersum
CDE09G0744 Ceratophyllum demersum
Cfa009890 Carpinus fangiana
Ciclev10017186m.g Citrus clementina
CiPaw.14G111700 Carya illinoinensis
ClCG02G022780 Citrullus lanatus
COL.COLO4_24488 Corchorus olitorius
Cpa.g.sc157.53 Carica papaya
Cre03.g158950 Chlamydomonas reinhardtii
CSS0014603 Camellia sinensis var. sinensis
CSS0031497 Camellia sinensis var. sinensis
Dinv09443 Davidia involucrata
Dinv37467 Davidia involucrata
Duzib170G0372 Durio zibethinus
ECA238G3020 Erigeron canadensis
EL10Ac1g00766 Beta vulgaris
EL10Ac5g12840 Beta vulgaris
EL10Ac9g21533 Beta vulgaris
Eucgr.B03747 Eucalyptus grandis
FAN12G1761 Fragaria x ananassa
FAN22G1152 Fragaria x ananassa
FvH4_4g01940 Fragaria vesca
Glyma.02G278800 Glycine max
Glyma.14G035900 Glycine max
Gohir.A13G218400 Gossypium hirsutum
Gohir.D13G222100 Gossypium hirsutum
Gorai.013G253200 Gossypium raimondii
GSVIVG01037329001 Vitis vinifera
HanXRQChr07g0196181 Helianthus annuus
HanXRQChr14g0453721 Helianthus annuus
Haze_23252 Corylus avellana
Haze_26695 Corylus avellana
Hma1.2p1_0214F.1_g090800 Hydrangea macrophylla
Hma1.2p1_1357F.1_g277915 Hydrangea macrophylla
HPP92_019149 Vanilla planifolia
Lalb_Chr10g0106211 Lupinus albus
Lalb_Chr17g0347851 Lupinus albus
LjContig00564g0010691 Lotus japonicus
Lsat_1_v5_gn_2_111680 Lactuca sativa
Lsat_1_v5_gn_2_28381 Lactuca sativa
Manes.01G177500 Manihot esculenta
Mapoly0207s0011 Marchantia polymorpha
MBI19_g20794_MAGBIO Magnolia biondii
MCO15G700 Micromonas commoda
MD08G1047500 Malus domestica
MD13G1049300 Malus domestica
Medtr5g089300 Medicago truncatula
MELO3C014555.2 Cucumis melo
Migut.N02377 Erythranthe guttata
Nitab4.5_0000069g0030 Nicotiana tabacum
Nitab4.5_0011609g0020 Nicotiana tabacum
Nn017s41474 Nelumbo nucifera
Nn7g36759 Nelumbo nucifera
Oeu032567.1 Olea europaea
Os03g0811700 Oryza sativa ssp. japonica
Peaxi162Scf00021g02522 Petunia axillaris
PGR102G0082 Punica granatum
PGSC0003DMG400016393 Solanum tuberosum
Phvul.008G202000 Phaseolus vulgaris
Potri.001G273200 Populus trichocarpa
Potri.009G067500 Populus trichocarpa
Pp3c14_2340 Physcomitrium patens
Pp3c1_15740 Physcomitrium patens
PRCOL_00006242 Prasinoderma coloniale
Prupe.1G025000 Prunus persica
Prupe.1G400800 Prunus persica
Psat2g020640 Pisum sativum
PSO339G3702 Papaver somniferum
PSO384G3308 Papaver somniferum
QL01p016848 Quercus lobata
RcHm_v2.0_Chr4g0388901 Rosa chinensis
Rhsim13G0207900 Rhododendron simsii
Sabra09G0050500 Salix brachista
SalBow1G1993 Salvia bowleyana
SalBow1G3729 Salvia bowleyana
SalBow8G2527 Salvia bowleyana
Sc12g0010240 Simmondsia chinensis
SEGI_07566 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41064 Striga asiatica
SGA_v2.0_scaffold310G48206 Striga asiatica
SGA_v2.0_scaffold34G13906 Striga asiatica
SGA_v2.0_scaffold3G01443 Striga asiatica
SGA_v2.0_scaffold5G02950 Striga asiatica
SMO143G0133 Selaginella moellendorffii
Solyc01g008360.3 Solanum lycopersicum
Sopen01g003880 Solanum pennellii
Sp6g31450 Schrenkiella parvula
TAR633G2719 Trochodendron aralioides
THA.LOC104799136 Tarenaya hassleriana
THA.LOC104811201 Tarenaya hassleriana
Thecc.09G247200 Theobroma cacao
Thhalv10015024m.g Eutrema salsugineum
TPR.G16400 Trifolium pratense
TWI75G0655 Tripterygium wilfordii
unitig_27.g25012 Utricularia gibba
unitig_699.g19149 Utricularia gibba
VMungo0647G0704 Vigna mungo
Zm00001eb062150 Zea mays
Zm00001eb212190 Zea mays

User provided reference genes

Program Settings