Gene: Carub.0006s1069

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s1069
  • Transcript Identifier Carub.0006s1069.1
  • Gene Type Coding gene
  • Location scaffold_6 : 3918562-3918936 : negative

Gene Family Information

  • ID HOM05D006044
  • #Genes/#Species 130/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s1069.v1.1
  • pacid 39246952
  • synonym Carubv10003798m.g

Descriptions

  • Description K12833 - pre-mRNA branch site protein p14 (SF3B14)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G12190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR034150 SF3B6, RNA recognition motif
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.2.1.2.4.6 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B6