Gene: COL.COLO4_24488

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_24488
  • Transcript Identifier COL.rna23224
  • Gene Type Coding gene
  • Location AWUE01018601.1 : 19344-19718 : negative

Gene Family Information

  • ID HOM05D006044
  • #Genes/#Species 130/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna23224
  • GenBank OMO79260.1
  • id gene24460
  • gene_name COLO4_24488
  • uniprot A0A1R3I9L8

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G12190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR034150 SF3B6, RNA recognition motif
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.1.2.4.6 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B6