Gene: PGR102G0082

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR102G0082
  • Transcript Identifier PGR102G0082.01
  • Gene Type Coding gene
  • Location NC_045129.1 : 32997830-32998204 : positive

Gene Family Information

  • ID HOM05D006044
  • #Genes/#Species 130/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031388662.1
  • name LOC116201542
  • name XM_031532802.1
  • id gene-LOC116201542
  • uniprot A0A2I0L938

Descriptions

  • product splicing factor 3B subunit 6-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G12190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR034150 SF3B6, RNA recognition motif
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.1.2.4.6 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B6