Gene: Cc03_g11600

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc03_g11600
  • Transcript Identifier Cc03_g11600.1
  • Gene Type Coding gene
  • Location chr3 : 16559262-16559642 : positive

Gene Family Information

  • ID HOM05D006044
  • #Genes/#Species 130/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q9Y3B4
  • UniProtKB Q9FMP4
  • UniProtKB I1JIW3
  • UniProtKB B7FGI3
  • UniProtKB P59708
  • UniProtKB A5AES3
  • id GSCOCG00019374001

Descriptions

  • Description Pre-mRNA branch site p14-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G12190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR034150 SF3B6, RNA recognition motif
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.2.1.2.4.6 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B6