Gene: TPR.G16400

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G16400
  • Transcript Identifier TPR.T16963
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG4 : 2386922-2387299 : negative

Gene Family Information

  • ID HOM05D006044
  • #Genes/#Species 130/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA16963.v2
  • id Tp57577_TGAC_v2_gene16400.v2
  • pacid 35964114
  • uniprot A0A2K3K0B1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G12190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR034150 SF3B6, RNA recognition motif
IPR000504 RNA recognition motif domain
Mapman id Description
16.2.1.2.4.6 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B6