Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40700 Brassica napus
A10p18310 Brassica napus
Aa31LG2G4780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1548 Anthoceros agrestis
Actinidia34808 Actinidia chinensis
Actinidia36072 Actinidia chinensis
Ah.10g033560 Amaranthus hybridus
AL5G17540 Arabidopsis lyrata
Aqoxy3G03052 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8IP107 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YT8U7M Arachis hypogaea
AT3G28030 Arabidopsis thaliana
ATR0629G036 Amborella trichopoda
Atru.chr6.2177 Acer truncatum
AUR62035939 Chenopodium quinoa
AUR62035940 Chenopodium quinoa
BcaC06g30938 Brassica carinata
BcaC06g33760 Brassica carinata
BolC7t43741H Brassica oleracea
BolC7t44234H Brassica oleracea
BraA06t26991Z Brassica rapa
BraA07t28693Z Brassica rapa
C07p37240 Brassica napus
C07p37280 Brassica napus
CAN.G983.2 Capsicum annuum
CANSAT64G0115 Cannabis sativa
CARHR149650 Cardamine hirsuta
Carub.0005s0655 Capsella rubella
Ca_14482_v3 Cicer arietinum L.
CBR_g74695 Chara braunii
Cc07_g02460 Coffea canephora
CDE10G1103 Ceratophyllum demersum
Cfa007452 Carpinus fangiana
Cfa026862 Carpinus fangiana
Ciclev10014025m.g Citrus clementina
CiPaw.04G023600 Carya illinoinensis
ClCG10G014410 Citrullus lanatus
COL.COLO4_04368 Corchorus olitorius
Cpa.g.sc140.34 Carica papaya
Cpa.g.sc140.35 Carica papaya
Cre10.g429050 Chlamydomonas reinhardtii
CsaV3_3G042180 Cucumis sativus L.
CSS0006408 Camellia sinensis var. sinensis
CSS0039879 Camellia sinensis var. sinensis
DCAR_011222 Daucus carota
Dinv09937 Davidia involucrata
Dinv35039 Davidia involucrata
Duzib147G0322 Durio zibethinus
Duzib264G0905 Durio zibethinus
ECA238G4583 Erigeron canadensis
EL10Ac1g00599 Beta vulgaris
Eucgr.I01829 Eucalyptus grandis
FAN05G0201 Fragaria x ananassa
FAN09G0355 Fragaria x ananassa
FAN14G4719 Fragaria x ananassa
FvH4_6g50430 Fragaria vesca
Glyma.01G077200 Glycine max
Gohir.A07G218700 Gossypium hirsutum
Gohir.D07G225712 Gossypium hirsutum
Gorai.001G260400 Gossypium raimondii
GSVIVG01032508001 Vitis vinifera
HanXRQChr04g0097971 Helianthus annuus
HanXRQChr14g0450181 Helianthus annuus
Haze_14649 Corylus avellana
Haze_14650 Corylus avellana
Hma1.2p1_0697F.1_g204850 Hydrangea macrophylla
Hma1.2p1_0697F.1_g204860 Hydrangea macrophylla
HPP92_006939 Vanilla planifolia
HPP92_006940 Vanilla planifolia
HPP92_029122 Vanilla planifolia
Hund12473 Selenicereus undatus
Lalb_Chr10g0093441 Lupinus albus
Lj1g0019005 Lotus japonicus
Lj7A589G58 Lonicera japonica
Lsat_1_v5_gn_2_92580 Lactuca sativa
Manes.15G181100 Manihot esculenta
Mapoly0177s0011 Marchantia polymorpha
MBI15_g24176_MAGBIO Magnolia biondii
MCO01G030 Micromonas commoda
MD17G1038000 Malus domestica
Medtr7g034405 Medicago truncatula
MELO3C009939.2 Cucumis melo
MELO3C022755.2 Cucumis melo
MELO3C028469.2 Cucumis melo
MELO3C028886.2 Cucumis melo
MELO3C029488.2 Cucumis melo
MELO3C033311.2 Cucumis melo
Migut.H00145 Erythranthe guttata
MSTRG.3182 Avicennia marina
Nitab4.5_0001709g0090 Nicotiana tabacum
Nitab4.5_0001727g0030 Nicotiana tabacum
Nn4g22860 Nelumbo nucifera
Oeu041219.1 Olea europaea
Os03g0205400 Oryza sativa ssp. japonica
Peaxi162Scf00368g00115 Petunia axillaris
PGR142G0990 Punica granatum
PGR142G3038 Punica granatum
PGSC0003DMG400006911 Solanum tuberosum
Phvul.008G152600 Phaseolus vulgaris
Potri.017G070500 Populus trichocarpa
Pp3c11_24040 Physcomitrium patens
PRCOL_00006730 Prasinoderma coloniale
Prupe.3G281300 Prunus persica
Psat3g171760 Pisum sativum
Psat3g171800 Pisum sativum
PSO063G3250 Papaver somniferum
PSO832G0708 Papaver somniferum
QL02p077165 Quercus lobata
RcHm_v2.0_Chr2g0170851 Rosa chinensis
Rhsim10G0025300 Rhododendron simsii
Sabra17G0050500 Salix brachista
SalBow1G3935 Salvia bowleyana
Sc06g0001630 Simmondsia chinensis
Sed0016811 Sechium edule
SEGI_00379 Sequoiadendron giganteum
SEGI_35695 Sequoiadendron giganteum
SEGI_39705 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34849 Striga asiatica
SHI22359 Sapria himalayana
SHI22361 Sapria himalayana
SHI22363 Sapria himalayana
SMO343G0130 Selaginella moellendorffii
SMO367G0233 Selaginella moellendorffii
Solyc02g067670.4 Solanum lycopersicum
Sopen02g016780 Solanum pennellii
Sp2g17030 Schrenkiella parvula
TAR629G0978 Trochodendron aralioides
THA.LOC104825294 Tarenaya hassleriana
Thecc.04G006200 Theobroma cacao
Thhalv10003517m.g Eutrema salsugineum
TPR.G15717 Trifolium pratense
TPR.G30816 Trifolium pratense
TWI56G1339 Tripterygium wilfordii
unitig_21.g20499 Utricularia gibba
vmacro05807 Vaccinium macrocarpon
VMungo0720G1364 Vigna mungo
VMungo1383G3393 Vigna mungo
Zm00001eb007570 Zea mays

User provided reference genes

Program Settings