Gene: arahy.Tifrunner.gnm1.ann1.YT8U7M
General Information
Structural Information
- Species Arachis hypogaea
- Gene Identifier arahy.Tifrunner.gnm1.ann1.YT8U7M
- Transcript Identifier arahy.Tifrunner.gnm1.ann1.YT8U7M.1
- Gene Type Coding gene
- Location arahy.Tifrunner.gnm1.Arahy.06 : 105672392-105683726 : positive
Gene Family Information
- ID HOM05D005583
- #Genes/#Species 138/100
- Phylogenetic origin
- ID ORTHO05D006507
- #Genes/#Species 142/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id arahy.Tifrunner.gnm1.ann1.YT8U7M.v1.0
- pacid 42638184
Descriptions
- Description K10846 - DNA excision repair protein ERCC-5 (ERCC5, XPG, RAD2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006289 | IEA | InterPro | nucleotide-excision repair | |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT3G28030 |
| GO:0010224 | ISO | PLAZA Integrative Orthology | response to UV-B | AT3G28030 |
| GO:0010213 | ISO | PLAZA Integrative Orthology | non-photoreactive DNA repair | AT3G28030 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004518 | IEA | InterPro | nuclease activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0003697 | IEA | InterPro | single-stranded DNA binding | |
| GO:0004519 | IEA | InterPro | endonuclease activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G28030 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006086 | XPG-I domain |
| IPR025527 | HUWE1/Rev1, ubiquitin binding region |
| IPR036279 | 5'-3' exonuclease, C-terminal domain superfamily |
| IPR006085 | XPG, N-terminal |
| IPR029060 | PIN-like domain superfamily |
| IPR008918 | Helix-hairpin-helix motif, class 2 |
| IPR006084 | XPG/Rad2 endonuclease |
| IPR001044 | XPG/Rad2 endonuclease, eukaryotes |
| Mapman id | Description |
|---|---|
| 14.6.5 | DNA damage response.nucleotide excision repair (NER).DNA repair endonuclease (XPG) |