Gene: AagrBONN_evm.TU.Sc2ySwM_228.1548

General Information

Structural Information

  • Species Anthoceros agrestis
  • Gene Identifier AagrBONN_evm.TU.Sc2ySwM_228.1548
  • Transcript Identifier AagrBONN_evm.model.Sc2ySwM_228.1548.2
  • Gene Type Coding gene
  • Location Sc2ySwM_228 : 6677919-6682831 : negative

Gene Family Information

  • ID HOM05D005583
  • #Genes/#Species 138/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name AagrBONN_EVM_Sc2ySwM_228.1548

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT3G28030
GO:0006289
ISO
PLAZA Homology (enrichment)nucleotide-excision repair HOM05D005583
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT3G28030
GO:0010213
ISO
PLAZA Integrative Orthologynon-photoreactive DNA repair AT3G28030

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
InterPronuclease activity
GO:0003677
IEA
InterProDNA binding
GO:0003824
IEA
InterProcatalytic activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G28030
GO:0004519
ISO
PLAZA Homology (enrichment)endonuclease activity HOM05D005583
GO:0003697
ISO
PLAZA Homology (enrichment)single-stranded DNA binding HOM05D005583

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Homology (enrichment)nucleus HOM05D005583

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036279 5'-3' exonuclease, C-terminal domain superfamily
IPR006086 XPG-I domain
IPR006084 XPG/Rad2 endonuclease
IPR008918 Helix-hairpin-helix motif, class 2
IPR029060 PIN-like domain superfamily
Mapman id Description
14.6.5 DNA damage response.nucleotide excision repair (NER).DNA repair endonuclease (XPG)